RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 TM4SF20Q53R12 229 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 SPSB3Q6PJ21 355 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 LINC00322Q6ZN03 302 aaPredicted RBP17.78■□□□□ 0.44
SHC1-201ENST00000366442 OR1P1Q8NH06 330 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 RAB2BQ8WUD1 216 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 MRGPRFQ96AM1 343 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 PLEKHA3Q9HB20 300 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 C21orf62Q9NYP8 219 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 MLXQ9UH92 298 aa17.78■□□□□ 0.44
SHC1-201ENST00000366442 RYR3Q15413 4870 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 OR2T8A6NH00 312 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 GABARAPH6UMI1 98 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 RGS5O15539 181 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 PIGPP57054 158 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 MRPS10P82664 201 aaKnown RBP17.77■□□□□ 0.44
SHC1-201ENST00000366442 TMEM61Q8N0U2 210 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 SCARB1Q8WTV0 552 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 BCL7BQ9BQE9 202 aa17.77■□□□□ 0.44
SHC1-201ENST00000366442 MRPL27Q9P0M9 148 aaKnown RBP17.77■□□□□ 0.44
SHC1-201ENST00000366442 K7EIM0 57 aa17.76■□□□□ 0.43
SHC1-201ENST00000366442 PRCDQ00LT1 54 aa17.76■□□□□ 0.43
SHC1-201ENST00000366442 CLVS1Q8IUQ0 354 aaPredicted RBP17.76■□□□□ 0.43
SHC1-201ENST00000366442 OR2C3Q8N628 320 aa17.76■□□□□ 0.43
SHC1-201ENST00000366442 TERB2Q8NHR7 220 aa17.76■□□□□ 0.43
SHC1-201ENST00000366442 TMEM190Q8WZ59 177 aa17.76■□□□□ 0.43
SHC1-201ENST00000366442 TRAV25A0A0B4J276 109 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 OR11H12B2RN74 326 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 CTDSP2O14595 271 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 PI3P19957 117 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 HSPE1P61604 102 aaKnown RBP17.75■□□□□ 0.43
SHC1-201ENST00000366442 SLC16A13Q7RTY0 426 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 ZNF114Q8NC26 417 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 OR4D10Q8NGI6 311 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 ZFAND1Q8TCF1 268 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 CCDC59Q9P031 241 aaKnown RBP17.75■□□□□ 0.43
SHC1-201ENST00000366442 RABL2AQ9UBK7 228 aaPredicted RBP17.75■□□□□ 0.43
SHC1-201ENST00000366442 RABL2BQ9UNT1 228 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 CEPT1Q9Y6K0 416 aa17.75■□□□□ 0.43
SHC1-201ENST00000366442 IGHV3-35A0A0C4DH35 117 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 F8W735 103 aaPredicted RBP17.74■□□□□ 0.43
SHC1-201ENST00000366442 NDUFA4O00483 81 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 RAB3DO95716 219 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 TMBIM6P55061 237 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 STEAP1BQ6NZ63 245 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 BTNL8Q6UX41 500 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 DEFB125Q8N687 156 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 TP53RKQ96S44 253 aa17.74■□□□□ 0.43
SHC1-201ENST00000366442 GAR1Q9NY12 217 aaKnown RBP17.74■□□□□ 0.43
SHC1-201ENST00000366442 IGHV3-21A0A0B4J1V1 117 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 C3orf85A0A1B0GTC6 90 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 ATG12O94817 140 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 PPP5CP53041 499 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 MEF2DQ14814 521 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 ANKRD55Q3KP44 614 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 CASC10Q5T4H9 136 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 CCDC71LQ8N9Z2 235 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 DYNC2LI1Q8TCX1 351 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 SMIM4Q8WVI0 70 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 EDA2RQ9HAV5 297 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 DAZ1Q9NQZ3 744 aaKnown RBP17.73■□□□□ 0.43
SHC1-201ENST00000366442 COPZ2Q9P299 210 aa17.73■□□□□ 0.43
SHC1-201ENST00000366442 B3GALNT1O75752 331 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 IGKV1-5P01602 117 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 P0C879 139 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 FCGR2BP31994 310 aaPredicted RBP17.72■□□□□ 0.43
SHC1-201ENST00000366442 SCGB2B2Q4G0G5 96 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 OR13C8Q8NGS7 320 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 CHRDL1Q9BU40 450 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 C5orf66Q9H5L9 145 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 SRD5A3Q9H8P0 318 aa17.72■□□□□ 0.43
SHC1-201ENST00000366442 RBMY1BA6NDE4 496 aaKnown RBP17.71■□□□□ 0.43
SHC1-201ENST00000366442 RBMY1EA6NEQ0 496 aaKnown RBP17.71■□□□□ 0.43
SHC1-201ENST00000366442 I3L2K1 104 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 CTDSPLO15194 276 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 CTSDP07339 412 aaPredicted RBP17.71■□□□□ 0.43
SHC1-201ENST00000366442 RBMY1DP0C7P1 496 aaKnown RBP17.71■□□□□ 0.43
SHC1-201ENST00000366442 ADMP35318 185 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 ERHP84090 104 aaKnown RBP17.71■□□□□ 0.43
SHC1-201ENST00000366442 Q56UQ5 140 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 RBPMS2Q6ZRY4 209 aaKnown RBP17.71■□□□□ 0.43
SHC1-201ENST00000366442 UBAC2Q8NBM4 344 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 OR52B4Q8NGK2 314 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 ISOC1Q96CN7 298 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 TXN2Q99757 166 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 WFDC10AQ9H1F0 79 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 SELENOKQ9Y6D0 94 aa17.71■□□□□ 0.43
SHC1-201ENST00000366442 INS-IGF2F8WCM5 200 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 K7EMT4 169 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 SCAF4O95104 1147 aaKnown RBP17.7■□□□□ 0.42
SHC1-201ENST00000366442 CTSGP08311 255 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 LYL1P12980 280 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 AKR1C2P52895 323 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 MARCH1Q8TCQ1 289 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 MISP3Q96FF7 219 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 DIRAS2Q96HU8 199 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 HIPK2Q9H2X6 1198 aa17.7■□□□□ 0.42
SHC1-201ENST00000366442 A0A0B4J293 547 aa17.69■□□□□ 0.42
SHC1-201ENST00000366442 UCP1P25874 307 aa17.69■□□□□ 0.42
SHC1-201ENST00000366442 RPL5P46777 297 aaKnown RBP17.69■□□□□ 0.42
SHC1-201ENST00000366442 SURF2Q15527 256 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms