RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 IGHV3-7P01780 117 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 PMP2P02689 132 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 FAM228BP0C875 321 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 NFYAP23511 347 aaPredicted RBP0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 MAGEA2P43356 314 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 MARCKSL1P49006 195 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 NAA20P61599 178 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 POLR2GP62487 172 aaKnown RBP eCLIP0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 RUNX1Q01196 453 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 CAV1Q03135 178 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 COTL1Q14019 142 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 CDK10Q15131 360 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 CLVS2Q5SYC1 327 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 AAED1Q7RTV5 226 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 TMEM156Q8N614 296 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 DEFB125Q8N687 156 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 C12orf29Q8N999 325 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 OR51D1Q8NGF3 324 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 RAB8BQ92930 207 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 CNBD2Q96M20 576 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 SERPINI1Q99574 410 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 YIPF3Q9GZM5 350 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 OR51I1Q9H343 314 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 EFCAB1Q9HAE3 211 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 USE1Q9NZ43 259 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 IL36BQ9NZH7 164 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 BAIAP2Q9UQB8 552 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 ATP6V1DQ9Y5K8 247 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 LAMA4Q16363 1823 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 SNRNP200O75643 2136 aaKnown RBP0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 SNAPC4Q5SXM2 1469 aa0.35□□□□□ -2.35
RNU4-48P-201ENST00000365559 ALPK3Q96L96 1907 aa0.34□□□□□ -2.35
RNU4-48P-201ENST00000365559 TOPBP1Q92547 1522 aa0.34□□□□□ -2.35
RNU4-48P-201ENST00000365559 SCN8AQ9UQD0 1980 aa0.34□□□□□ -2.35
RNU4-48P-201ENST00000365559 TRBV20OR9-2A0A075B6H5 130 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 A0A0J9YY10 115 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 A0A1B0GX78 115 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 FUOMA2VDF0 154 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 FABP5P3A8MUU1 101 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 INMT-MINDY4F8WBC2 141 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 ACOX3O15254 700 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 TNNC2P02585 160 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 PRM2P04554 102 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 CALB1P05937 261 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 METTL15P1P0C7V9 234 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 FGF6P10767 208 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 RPS4Y1P22090 263 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 DCCP43146 1447 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 FXYD2P54710 66 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 TCL1AP56279 114 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 SUPT4H1P63272 117 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 RPL18Q07020 188 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZNF846Q147U1 533 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 GRK1Q15835 563 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 C9orf84Q5VXU9 1444 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 CD200R1LQ6Q8B3 271 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 Q6ZS49 121 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 C10orf67Q8IYJ2 551 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 LINC00471Q8N535 108 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 WFDC11Q8NEX6 87 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 GPR32P1Q8NGA4 272 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 MCFD2Q8NI22 146 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 AQP3Q92482 292 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 LLPHQ9BRT6 129 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 MRPS26Q9BYN8 205 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 WDR61Q9GZS3 305 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 PEAK1Q9H792 1746 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 XPNPEP1Q9NQW7 623 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 LSM5Q9Y4Y9 91 aaKnown RBP0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 MYLKQ15746 1914 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 TTC21AQ8NDW8 1320 aa0.34□□□□□ -2.36
RNU4-48P-201ENST00000365559 GPR98Q8WXG9 6306 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 MAP3K5Q99683 1374 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HECW2Q9P2P5 1572 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 PTPRFP10586 1907 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 DCTN3O75935 186 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 C1QAP02745 245 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 SHBGP04278 402 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 ISG15P05161 165 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BOP23527 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BBP33778 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZNF80P51504 273 aaPredicted RBP0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BDP58876 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 RAB5BP61020 215 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BCP62807 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 CCL20P78556 96 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 IFITM2Q01629 132 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 STX5Q13190 355 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 GUK1Q16774 197 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST2H2BEQ16778 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 CDKL4Q5MAI5 379 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 IBA57Q5T440 356 aaKnown RBP0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST2H3PS2Q5TEC6 136 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 AADACL3Q5VUY0 350 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 SYPL2Q5VXT5 272 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 IQCF2Q8IXL9 164 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR2T4Q8NH00 348 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR4C6Q8NH72 309 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 MRPL30Q8TCC3 161 aaKnown RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms