RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 H3F3AP84243 136 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 RUNX1Q01196 453 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 IAH1Q2TAA2 248 aaPredicted RBP1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 AKIRIN2Q53H80 203 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 TMEM97Q5BJF2 176 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 AADACL3Q5VUY0 350 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 RPL22L1Q6P5R6 122 aaKnown RBP1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 Q6ZRN7 208 aaPredicted RBP1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 C20orf27Q9GZN8 174 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 GLTPQ9NZD2 209 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 TP73-AS1Q9UF72 201 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 HECW2Q9P2P5 1572 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 FBN1P35555 2871 aaKnown RBP1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 SMARCA4P51532 1647 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 PIK3C2GO75747 1445 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 FAM236DA0A1B0GTK5 79 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 EXOC1LA0A1B0GW35 172 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 MEIS3P1A6NDR6 274 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 ZNF860A6NHJ4 632 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 FAM236CP0DP71 79 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 ZNF80P51504 273 aaPredicted RBP1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 FXYD2P54710 66 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 TMEM86AQ8N2M4 240 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 RASSF5Q8WWW0 418 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 TOMM6Q96B49 74 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 CHMP6Q96FZ7 201 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 CMSS1Q9BQ75 279 aaKnown RBP1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 TMEM147Q9BVK8 224 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 TRIM4Q9C037 500 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 C11orf68Q9H3H3 251 aaKnown RBP1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 C8orf4Q9NR00 106 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 IDI2-AS1Q9NZ38 188 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 FBXO5Q9UKT4 447 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 PRELID3BQ9Y3B1 194 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 AMMECR1Q9Y4X0 333 aaPredicted RBP1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 ROBO3Q96MS0 1386 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 MAST2Q6P0Q8 1798 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 MALRD1Q5VYJ5 2156 aa1.44□□□□□ -2.18
RNU6-28P-201ENST00000362378 NEO1Q92859 1461 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 CPAMD8Q8IZJ3 1885 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 GBF1Q92538 1859 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 CCDC144AA2RUR9 1427 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 DPRXA6NFQ7 191 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 ZNF737O75373 536 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 CIAO1O76071 339 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 G6PCP35575 357 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 AQP4P55087 323 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 SUPT4H1P63272 117 aaKnown RBP1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 REEP5Q00765 189 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 CDK10Q15131 360 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 TMEM155Q4W5P6 130 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 SPANXN3Q5MJ09 141 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 OR6V1Q8N148 313 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 OR5B17Q8NGF7 314 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 MCFD2Q8NI22 146 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 DOK5Q9P104 306 aa1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 MDC1Q14676 2089 aaKnown RBP1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 COL11A1P12107 1806 aaPredicted RBP1.43□□□□□ -2.18
RNU6-28P-201ENST00000362378 TRAV9-1A0A075B6T8 112 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 MEIKINA0A087WXM9 373 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 hADV38S2A0JD32 116 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 SIGLEC16A6NMB1 481 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 CRYZL1O95825 349 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 IFNA10P01566 189 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 GPX1P07203 203 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 TRGC1P0CF51 173 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 SMIM10L2AP0DMW4 78 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 SMIM10L2BP0DMW5 78 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 RPS4Y1P22090 263 aaKnown RBP1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 CTAG1AP78358 180 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 KISS1Q15726 138 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 SLC36A1Q7Z2H8 476 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 C12orf45Q8N5I9 185 aaPredicted RBP1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 PFN4Q8NHR9 129 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 CT55Q8WUE5 264 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 C11orf40Q8WZ69 217 aa1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 H1FXQ92522 213 aaKnown RBP1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 ZNF625Q96I27 306 aaPredicted RBP1.42□□□□□ -2.18
RNU6-28P-201ENST00000362378 ADGRL3Q9HAR2 1447 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 IBA57-AS1B1ANH7 110 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 PIRO00625 290 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 CLPSP04118 112 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 HSD11B1P28845 292 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 SPA17Q15506 151 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 MOGQ16653 247 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 NDUFA5Q16718 116 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 C12orf74Q32Q52 190 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 C7orf65Q6ZTY9 151 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 OOSP2Q86WS3 158 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 COA5Q86WW8 74 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 DHFR2Q86XF0 187 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 GDPD1Q8N9F7 314 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 C9orf163Q8N9P6 203 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 KIF24Q5T7B8 1368 aa1.41□□□□□ -2.18
RNU6-28P-201ENST00000362378 RGS12O14924 1447 aa1.4□□□□□ -2.18
RNU6-28P-201ENST00000362378 TOPBP1Q92547 1522 aa1.4□□□□□ -2.18
RNU6-28P-201ENST00000362378 HECW1Q76N89 1606 aa1.4□□□□□ -2.18
RNU6-28P-201ENST00000362378 GREB1Q4ZG55 1949 aa1.4□□□□□ -2.18
RNU6-28P-201ENST00000362378 PDE6DO43924 150 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms