RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TRGV8A0A0C4DH27 118 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 FNDC10F2Z333 226 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 APCSP02743 223 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 GUSBP1Q15486 140 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 TRIB1Q96RU8 372 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 ACACAQ13085 2346 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 HBZP02008 142 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 VDAC2P45880 294 aaPredicted RBP15.7■□□□□ 0.1
CMTM3-201ENST00000361909 SPINK9Q5DT21 86 aa15.7■□□□□ 0.1
CMTM3-201ENST00000361909 HEYLQ9NQ87 328 aaPredicted RBP15.7■□□□□ 0.1
CMTM3-201ENST00000361909 URB1O60287 2271 aaKnown RBP15.7■□□□□ 0.1
CMTM3-201ENST00000361909 FREM1Q5H8C1 2179 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 MED12LQ86YW9 2145 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 TRAV34A0A0B4J273 112 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 IZUMO1RA6ND01 250 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 H0YJW9 148 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 HAND1O96004 215 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 CEACAM8P31997 349 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-201ENST00000361909 TEPPQ6URK8 271 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 FAM214BQ7L5A3 538 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 OR4F17Q8NGA8 305 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 WNT10AQ9GZT5 417 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 FRMD6-AS1P0C7T7 363 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 KLF5Q13887 457 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-201ENST00000361909 GABRA6Q16445 453 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 FAM162BQ5T6X4 162 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 OR4A16Q8NH70 328 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 CLEC7AQ9BXN2 247 aa15.69■□□□□ 0.1
CMTM3-201ENST00000361909 ZNF503-AS2A6NEH8 195 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 OR9G9P0C7N8 305 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 GABRA2P47869 451 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 PRAMEF5Q5TYX0 476 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 PRAMEF6Q5VXH4 476 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 TRAT1Q6PIZ9 186 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 STPG3Q8N7X2 389 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 OR8B3Q8NGG8 313 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 OR52L2PQ8NGH6 319 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 C18orf32Q8TCD1 76 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 OR8B2Q96RD0 313 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 SAP30LQ9HAJ7 183 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 ZNF331Q9NQX6 463 aaPredicted RBP15.68■□□□□ 0.1
CMTM3-201ENST00000361909 C12orf49Q9H741 205 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 C1RLQ9NZP8 487 aa15.68■□□□□ 0.1
CMTM3-201ENST00000361909 ESPL1Q14674 2120 aa15.67■□□□□ 0.1
CMTM3-201ENST00000361909 FAM181BA6NEQ2 426 aa15.67■□□□□ 0.1
CMTM3-201ENST00000361909 HSBP1O75506 76 aa15.67■□□□□ 0.1
CMTM3-201ENST00000361909 UBE2G1P62253 170 aa15.67■□□□□ 0.1
CMTM3-201ENST00000361909 IBA57Q5T440 356 aaKnown RBP15.67■□□□□ 0.1
CMTM3-201ENST00000361909 WDR86Q86TI4 376 aa15.67■□□□□ 0.1
CMTM3-201ENST00000361909 NANOS1Q8WY41 292 aaKnown RBP15.67■□□□□ 0.1
CMTM3-201ENST00000361909 LINC00473A8K010 186 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 ERVK-16P61578 105 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 PQLC2Q6ZP29 291 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 NCOR1P1Q9H4R4 102 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 ST20Q9HBF5 79 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 SEPSECSQ9HD40 501 aaKnown RBP15.66■□□□□ 0.1
CMTM3-201ENST00000361909 NTF3P20783 257 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 DUTP33316 252 aaKnown RBP15.66■□□□□ 0.1
CMTM3-201ENST00000361909 FOXG1P55316 489 aaPredicted RBP15.66■□□□□ 0.1
CMTM3-201ENST00000361909 KIAA1644Q3SXP7 199 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 C9orf135Q5VTT2 229 aa15.66■□□□□ 0.1
CMTM3-201ENST00000361909 J3QR06 171 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 TOX4O94842 621 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 ADH4P08319 380 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 USF1P22415 310 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PRR20EP86478 221 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PRR20CP86479 221 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PRR20DP86480 221 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PRR20BP86481 221 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PRR20AP86496 221 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 C9orf106Q8NAJ2 232 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PRR7Q8TB68 274 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 C19orf24Q9BVV8 132 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 RAXQ9Y2V3 346 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 MBD3L4A6NDZ8 208 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-201ENST00000361909 MBD3L3A6NE82 208 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-201ENST00000361909 MBD3L5A6NJ08 208 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-201ENST00000361909 PPOXP50336 477 aa15.65■□□□□ 0.1
CMTM3-201ENST00000361909 MBD3L2Q8NHZ7 208 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-201ENST00000361909 CGAP01215 116 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 KIR2DL2P43627 348 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-201ENST00000361909 KIR2DS2P43631 304 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 VAMP3Q15836 100 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 DOLPP1Q86YN1 238 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 FAM19A2Q8N3H0 131 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 SSMEM1Q8WWF3 244 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 BCL2L2Q92843 193 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-201ENST00000361909 CHRDL1Q9BU40 450 aa15.64■□□□□ 0.09
CMTM3-201ENST00000361909 RNASE7Q9H1E1 156 aaKnown RBP15.64■□□□□ 0.09
CMTM3-201ENST00000361909 TECRQ9NZ01 308 aaKnown RBP15.64■□□□□ 0.09
CMTM3-201ENST00000361909 M0R2Z0 102 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 ZNHIT1O43257 154 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 OR2J3O76001 311 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 NPY1RP25929 384 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 CRYBB3P26998 211 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 REG1BP48304 166 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 SPATA31B1PQ5VZV4 182 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 PET117Q6UWS5 81 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 Q6ZT83 130 aa15.63■□□□□ 0.09
CMTM3-201ENST00000361909 DOCK7Q96N67 2140 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms