RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SULT1A3P0DMM9 295 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 SULT1A4P0DMN0 295 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BOP23527 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BBP33778 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BDP58876 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BCP62807 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 MRPS25P82663 173 aaKnown RBP2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST2H2BEQ16778 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 C12orf74Q32Q52 190 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.05□□□□□ -2.08
RPL39-201ENST00000361575 IBA57Q5T440 356 aaKnown RBP2.05□□□□□ -2.08
RPL39-201ENST00000361575 RNASE11Q8TAA1 199 aaKnown RBP2.05□□□□□ -2.08
RPL39-201ENST00000361575 PHOSPHO2Q8TCD6 241 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BHQ93079 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BNQ99877 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 HIST1H2BMQ99879 126 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 CHST6Q9GZX3 395 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 TIMM9Q9Y5J7 89 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 RTEL1-TNFRSF6BF6WH68 1400 aa2.05□□□□□ -2.08
RPL39-201ENST00000361575 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 IGLV3-9A0A075B6K5 115 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 A0A0D9SEW6 157 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 DPRXA6NFQ7 191 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 FAM159BA6NKW6 160 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 FABP5P3A8MUU1 101 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 J3QQQ9 107 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 PDE6DO43924 150 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 ZNF682O95780 498 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 CRYZL1O95825 349 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 RPL26P61254 145 aaKnown RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 SUPT4H1P63272 117 aaKnown RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 ERHP84090 104 aaKnown RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 TAF1AQ15573 450 aaPredicted RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 PCOTHQ58A44 107 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 FAM27BQ5VT28 67 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 TMEM42Q69YG0 159 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 LRRC28Q86X40 367 aaPredicted RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 OR51A2Q8NGJ7 313 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 OR13C4Q8NGS5 318 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 OR10X1Q8NGY0 326 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 H1FXQ92522 213 aaKnown RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 TOMM6Q96B49 74 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 CCDC94Q9BW85 323 aaPredicted RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 C20orf27Q9GZN8 174 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 COMMD5Q9GZQ3 224 aa2.04□□□□□ -2.08
RPL39-201ENST00000361575 RPL26L1Q9UNX3 145 aaKnown RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 AMMECR1Q9Y4X0 333 aaPredicted RBP2.04□□□□□ -2.08
RPL39-201ENST00000361575 NEO1Q92859 1461 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 OR7C1O76099 320 aaPredicted RBP2.03□□□□□ -2.08
RPL39-201ENST00000361575 S1PR2O95136 353 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 MSMBP08118 114 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 SMIM10L2AP0DMW4 78 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 SMIM10L2BP0DMW5 78 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 G6PCP35575 357 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 AQP4P55087 323 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 DEFB103AP81534 67 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 SPA17Q15506 151 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 RPL22L1Q6P5R6 122 aaKnown RBP2.03□□□□□ -2.08
RPL39-201ENST00000361575 CT55Q8WUE5 264 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 RASSF5Q8WWW0 418 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 CMSS1Q9BQ75 279 aaKnown RBP2.03□□□□□ -2.08
RPL39-201ENST00000361575 CYSLTR1Q9Y271 337 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 ARL2BPQ9Y2Y0 163 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 CCDC88CQ9P219 2028 aa2.03□□□□□ -2.08
RPL39-201ENST00000361575 SCAF11Q99590 1463 aaKnown RBP2.02□□□□□ -2.09
RPL39-201ENST00000361575 KIF24Q5T7B8 1368 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 BUB1B-PAK6H3BSN5 160 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 OR2J2O76002 312 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 PSMD8P48556 350 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 ZNF80P51504 273 aaPredicted RBP2.02□□□□□ -2.09
RPL39-201ENST00000361575 ARF6P62330 175 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 HIST1H4AP62805 103 aaKnown RBP2.02□□□□□ -2.09
RPL39-201ENST00000361575 SLC38A11Q08AI6 406 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 GDPD1Q8N9F7 314 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 C9orf163Q8N9P6 203 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 OR52R1Q8NGF1 315 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 DCANP1Q8TF63 244 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 CAMSAP1Q5T5Y3 1602 aa2.02□□□□□ -2.09
RPL39-201ENST00000361575 DENND4BO75064 1496 aaPredicted RBP2.01□□□□□ -2.09
RPL39-201ENST00000361575 RTTNQ86VV8 2226 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 DOCK10Q96BY6 2186 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 TRAV9-1A0A075B6T8 112 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 IRGMA1A4Y4 181 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 OR51F1A6NGY5 319 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 NAPSAO96009 420 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 CLPSP04118 112 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 SERPINE1P05121 402 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 RPS4Y1P22090 263 aaKnown RBP2.01□□□□□ -2.09
RPL39-201ENST00000361575 EMP1P54849 157 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 GLO1Q04760 184 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 MOGQ16653 247 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 LIN52Q52LA3 116 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 KTN1-AS1Q86SY8 53 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 OOSP2Q86WS3 158 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 TERB2Q8NHR7 220 aa2.01□□□□□ -2.09
RPL39-201ENST00000361575 SLC7A6Q92536 515 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms