RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 IGHV3-7P01780 117 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 MYL9P24844 172 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 RPS7P62081 194 aaKnown RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 RPS27AP62979 156 aaKnown RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 SPANXN2Q5MJ10 180 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 DHFR2Q86XF0 187 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 GDPD1Q8N9F7 314 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 FAM103A1Q9BTL3 118 aaKnown RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 CCDC90BQ9GZT6 254 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 NXF2Q9GZY0 626 aaKnown RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 EXTL2Q9UBQ6 330 aa4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 EXOSC1Q9Y3B2 195 aaKnown RBP4.23□□□□□ -1.73
CDC42SE2-201ENST00000360515 TMEM14DPA8MWL7 114 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 KRBOX1C9JBD0 128 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 SMLR1H3BR10 107 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 TGOLN2O43493 480 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 BPNT1O95861 308 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 S100A9P06702 114 aaKnown RBP4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 ETV6P41212 452 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZIK1Q3SY52 487 aaPredicted RBP4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR5T1Q8NG75 326 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR5AK2Q8NH90 309 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 GPR148Q8TDV2 347 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 RFT1Q96AA3 541 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 ERVK13-1Q9NX77 482 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 AGRNO00468 2067 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 A0A0B4J293 547 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGKV1-6A0A0C4DH72 117 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGHV7-4-1A0A0J9YVY3 117 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 PTGES3LE9PB15 166 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 CHEK1O14757 476 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR7C1O76099 320 aaPredicted RBP4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 IFNA7P01567 189 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 FGF9P31371 208 aaPredicted RBP4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 DUTP33316 252 aaKnown RBP4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 COTL1Q14019 142 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 GUCA2BQ16661 112 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 C16orf54Q6UWD8 224 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 UNQ9165/PRO28630Q6UXU0 137 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 C8orf59Q8N0T1 100 aaPredicted RBP4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR10V1Q8NGI7 309 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 VSTM2AQ8TAG5 236 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR2A7Q96R45 310 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 Q9H3A6 140 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 PEX16Q9Y5Y5 336 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 DEFB131BA0A096LNP1 70 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 K7EP13 123 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 KBTBD11O94819 623 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 ALPLP05186 524 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 CALCBP10092 127 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 CD36P16671 472 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 SCN1BQ07699 218 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 BAK1Q16611 211 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 Q5VSD8 79 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 BTNL8Q6UX41 500 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 ACBD7Q8N6N7 88 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 SFT2D1Q8WV19 159 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 MND1Q9BWT6 205 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 SLC35D1Q9NTN3 355 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 SDHAF2Q9NX18 166 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 UBQLN2Q9UHD9 624 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 GNG8Q9UK08 70 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 U3KQE9 123 aa4.22□□□□□ -1.73
CDC42SE2-201ENST00000360515 TRAV39A0A0B4J263 110 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR2C1O95371 312 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 H2AFB1P0C5Y9 115 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 H2AFB2P0C5Z0 115 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 CPEP16870 476 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 PJVKQ0ZLH3 352 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 TTC23Q5W5X9 447 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 RBPMS2Q6ZRY4 209 aaKnown RBP4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 SSX9Q7RTT3 188 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 CCDC190Q86UF4 302 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 TCEANCQ8N8B7 351 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 ZNF430Q9H8G1 570 aaPredicted RBP4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 FAM212BQ9NTI7 297 aaPredicted RBP4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 TAS2R4Q9NYW5 299 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 PPP5D1E7EU14 171 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 NPY1RP25929 384 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 PSMB9P28065 219 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 SNU13P55769 128 aaKnown RBP4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 MED22Q15528 200 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 RTL8BQ17RB0 113 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 TP53I3Q53FA7 332 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 ATRAIDQ6UW56 229 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 SMIM19Q96E16 107 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 OR51E2Q9H255 320 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 CHMP1AQ9HD42 196 aaPredicted RBP4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 DKK2Q9UBU2 259 aa4.21□□□□□ -1.74
CDC42SE2-201ENST00000360515 IGLC7A0M8Q6 106 aa4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 HPGDSO60760 199 aa4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 RPP14O95059 124 aaKnown RBP4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 IGLV2-14P01704 120 aa4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 S100A8P05109 93 aa4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 CTSDP07339 412 aaPredicted RBP4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 TAS2R60P59551 318 aa4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 FGL1Q08830 312 aa4.2□□□□□ -1.74
CDC42SE2-201ENST00000360515 LTC4SQ16873 150 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms