RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SLC25A32Q9H2D1 315 aa18.44■□□□□ 0.54
SDF4-202ENST00000360001 TEX22C9J3V5 150 aa18.43■□□□□ 0.54
SDF4-202ENST00000360001 OR13C7P0DN81 318 aa18.43■□□□□ 0.54
SDF4-202ENST00000360001 RUNX1Q01196 453 aa18.43■□□□□ 0.54
SDF4-202ENST00000360001 LRRC75BQ2VPJ9 315 aa18.43■□□□□ 0.54
SDF4-202ENST00000360001 UQCC1Q9NVA1 299 aa18.43■□□□□ 0.54
SDF4-202ENST00000360001 RFNGQ9Y644 331 aa18.43■□□□□ 0.54
SDF4-202ENST00000360001 UBE2L5PA0A1B0GUS4 154 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 FAM157CP0CG43 387 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 TUSC1Q2TAM9 212 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 Q8N9W7 124 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 PARD6GQ9BYG4 376 aaPredicted RBP18.42■□□□□ 0.54
SDF4-202ENST00000360001 C1RLQ9NZP8 487 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 FSHBP01225 129 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 FBP1P09467 338 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 NDUFA5Q16718 116 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 SLC25A24Q6NUK1 477 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 SLC7A5P1Q8MH63 180 aa18.42■□□□□ 0.54
SDF4-202ENST00000360001 WDR61Q9GZS3 305 aaKnown RBP18.42■□□□□ 0.54
SDF4-202ENST00000360001 ZFHX3Q15911 3703 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 CNIH1O95406 144 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 AREGP15514 252 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 GGACTQ9BVM4 153 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 FLNAP21333 2647 aaKnown RBP18.41■□□□□ 0.54
SDF4-202ENST00000360001 REG1AP05451 166 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 BPIFB3P59826 476 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 ZNF562Q6V9R5 426 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 SCGB1C1Q8TD33 95 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 GNPNAT1Q96EK6 184 aaPredicted RBP18.41■□□□□ 0.54
SDF4-202ENST00000360001 P2RX4Q99571 388 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 SSX3Q99909 188 aa18.41■□□□□ 0.54
SDF4-202ENST00000360001 FGF16O43320 207 aa18.4■□□□□ 0.54
SDF4-202ENST00000360001 APELAP0DMC3 54 aa18.4■□□□□ 0.54
SDF4-202ENST00000360001 DLK1P80370 383 aa18.4■□□□□ 0.54
SDF4-202ENST00000360001 FXYD3Q14802 87 aa18.4■□□□□ 0.54
SDF4-202ENST00000360001 MRPL41Q8IXM3 137 aaKnown RBP18.4■□□□□ 0.54
SDF4-202ENST00000360001 RNF141Q8WVD5 230 aa18.4■□□□□ 0.54
SDF4-202ENST00000360001 SMAD7O15105 426 aaKnown RBP18.39■□□□□ 0.53
SDF4-202ENST00000360001 MDKP21741 143 aaPredicted RBP18.39■□□□□ 0.53
SDF4-202ENST00000360001 SULT1A2P50226 295 aa18.39■□□□□ 0.53
SDF4-202ENST00000360001 CX3CL1P78423 397 aa18.39■□□□□ 0.53
SDF4-202ENST00000360001 SSMEM1Q8WWF3 244 aa18.39■□□□□ 0.53
SDF4-202ENST00000360001 TAF15Q92804 592 aaKnown RBP eCLIP18.39■□□□□ 0.53
SDF4-202ENST00000360001 ZNF114Q8NC26 417 aa18.39■□□□□ 0.53
SDF4-202ENST00000360001 SRSF8Q9BRL6 282 aaKnown RBP18.39■□□□□ 0.53
SDF4-202ENST00000360001 RSG1Q9BU20 258 aa18.39■□□□□ 0.53
SDF4-202ENST00000360001 ARSJQ5FYB0 599 aaPredicted RBP18.38■□□□□ 0.53
SDF4-202ENST00000360001 HSD17B13Q7Z5P4 300 aaPredicted RBP18.38■□□□□ 0.53
SDF4-202ENST00000360001 BCL6BQ8N143 479 aaPredicted RBP18.38■□□□□ 0.53
SDF4-202ENST00000360001 OR2G3Q8NGZ4 309 aa18.38■□□□□ 0.53
SDF4-202ENST00000360001 NANPQ8TBE9 248 aa18.38■□□□□ 0.53
SDF4-202ENST00000360001 RBM14Q96PK6 669 aaKnown RBP18.38■□□□□ 0.53
SDF4-202ENST00000360001 SUB1P53999 127 aaKnown RBP eCLIP18.37■□□□□ 0.53
SDF4-202ENST00000360001 NDPQ00604 133 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 TMEM219Q86XT9 240 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 CXorf58Q96LI9 332 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 LINC00862A6NCI5 91 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 HLA-DRB1P01911 266 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 PVRIGQ6DKI7 326 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 C19orf35Q6ZS72 473 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 LRRC20Q8TCA0 184 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 ARPC1AQ92747 370 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 RASL11BQ9BPW5 248 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 SLC25A33Q9BSK2 321 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 FAM103A1Q9BTL3 118 aaKnown RBP18.37■□□□□ 0.53
SDF4-202ENST00000360001 WDR83OSQ9Y284 106 aa18.37■□□□□ 0.53
SDF4-202ENST00000360001 IGHV7-81A0A0B4J1V7 117 aa18.36■□□□□ 0.53
SDF4-202ENST00000360001 MDFIC2A0A1B0GVS7 189 aa18.36■□□□□ 0.53
SDF4-202ENST00000360001 H3BUX3 64 aa18.36■□□□□ 0.53
SDF4-202ENST00000360001 FGF7P21781 194 aa18.36■□□□□ 0.53
SDF4-202ENST00000360001 AANATQ16613 207 aa18.36■□□□□ 0.53
SDF4-202ENST00000360001 TMEM182Q6ZP80 229 aaPredicted RBP18.36■□□□□ 0.53
SDF4-202ENST00000360001 SMCO3A2RU48 225 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 MFAP2P55001 183 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 DEFB112Q30KQ8 113 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 TREML4Q6UXN2 200 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 C5orf56Q8N8D9 126 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 ABHD5Q8WTS1 349 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 PSMG3Q9BT73 122 aaPredicted RBP18.35■□□□□ 0.53
SDF4-202ENST00000360001 ZNF705EA8MWA4 302 aaPredicted RBP18.35■□□□□ 0.53
SDF4-202ENST00000360001 FNDC10F2Z333 226 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 BTNL8Q6UX41 500 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 RNASEH2CQ8TDP1 164 aaKnown RBP18.35■□□□□ 0.53
SDF4-202ENST00000360001 C22orf15Q8WYQ4 148 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 HSPB9Q9BQS6 159 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 MOB4Q9Y3A3 225 aa18.35■□□□□ 0.53
SDF4-202ENST00000360001 F11RQ9Y624 299 aaKnown RBP18.35■□□□□ 0.53
SDF4-202ENST00000360001 A6NDX4 124 aa18.34■□□□□ 0.53
SDF4-202ENST00000360001 CD69Q07108 199 aa18.34■□□□□ 0.53
SDF4-202ENST00000360001 MLANAQ16655 118 aa18.34■□□□□ 0.53
SDF4-202ENST00000360001 C9orf139Q6ZV77 190 aa18.34■□□□□ 0.53
SDF4-202ENST00000360001 CENPVQ7Z7K6 275 aaPredicted RBP18.34■□□□□ 0.53
SDF4-202ENST00000360001 OR1P1Q8NH06 330 aa18.34■□□□□ 0.53
SDF4-202ENST00000360001 FBXO7Q9Y3I1 522 aa18.34■□□□□ 0.53
SDF4-202ENST00000360001 ATP6V1G1O75348 118 aa18.33■□□□□ 0.53
SDF4-202ENST00000360001 SAT2Q96F10 170 aaPredicted RBP18.33■□□□□ 0.53
SDF4-202ENST00000360001 NPCDR1Q9BY65 106 aa18.33■□□□□ 0.53
SDF4-202ENST00000360001 NPVFQ9HCQ7 196 aa18.33■□□□□ 0.53
SDF4-202ENST00000360001 TIMM9Q9Y5J7 89 aa18.33■□□□□ 0.53
SDF4-202ENST00000360001 CTRB1P17538 263 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms