RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 M0R1X1 148 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 OVOL3O00110 214 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 BCL2P10415 239 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 CT45A1Q5HYN5 189 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 WDR25Q64LD2 544 aaPredicted RBP11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF439Q8NDP4 499 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 CT45A3Q8NHU0 189 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 SCGB1C1Q8TD33 95 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 A0A1W2PPQ1 181 aa11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 HAPLN4Q86UW8 402 aa11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 RPUSD1Q9UJJ7 312 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 GCGP01275 180 aa11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 IL6RP08887 468 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
CSNK1E-201ENST00000359867 NDUFB3O43676 98 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 NEU4Q8WWR8 484 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 S1PR3Q99500 378 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 RBKSQ9H477 322 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 POLR3KQ9Y2Y1 108 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 CLDN34H7C241 214 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 M0QZK8 103 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 CCL25O15444 150 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 FCGR3BO75015 233 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 FSTL3O95633 263 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 THBS3P49746 956 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 ADIRFQ15847 76 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 SPANXN5Q5MJ07 72 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 DDB2Q92466 427 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 UNC79Q9P2D8 2635 aa11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 YLPM1P49750 1951 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-201ENST00000359867 UBE2L5PA0A1B0GUS4 154 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 LINC00205P59089 165 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 HBG1P69891 147 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 HBG2P69892 147 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 CIB3Q96Q77 187 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 EFNA4P52798 201 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 C1orf194Q5T5A4 169 aa11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-201ENST00000359867 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 IGHV3-7P01780 117 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 DPPA3Q6W0C5 159 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 OR1L6Q8NGR2 347 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 OR4X1Q8NH49 305 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 OR4S2Q8NH73 311 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 PERPQ96FX8 193 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 DSCAML1Q8TD84 2053 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 NAV2Q8IVL1 2488 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 SAA2-SAA4A0A096LPE2 208 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 KIR2DL5BA0A0G2JN68 375 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 KIR2DL5BA0A0G2JPC4 375 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 SAA2P0DJI9 122 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 PTTG1IPP53801 180 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 ERVK-16P61578 105 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 TMEM14EPQ6UXP3 125 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 KIR2DL5AQ8N109 375 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 OR4C12Q96R67 309 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 ITPR2Q14571 2701 aa11.3□□□□□ -0.6
CSNK1E-201ENST00000359867 CBY3A6NI87 242 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 MMP23AO75900 390 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 UTF1Q5T230 341 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 PRAMEF5Q5TYX0 476 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 TMEM200BQ69YZ2 307 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 LYPD2Q6UXB3 125 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 B4DEV8 164 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 DEFA4P12838 97 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 C16orf82Q7Z2V1 217 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 LYG1Q8N1E2 194 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 SMIM7Q9BQ49 75 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 ZFP30Q9Y2G7 519 aa11.29□□□□□ -0.6
CSNK1E-201ENST00000359867 FCN3O75636 299 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 ATP5J2P56134 94 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 OR5T1Q8NG75 326 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms