RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 A8MXE2 369 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 PAX1P15863 534 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 OR10J1P30954 320 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 IQCJQ1A5X6 159 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 TMEM30BQ3MIR4 351 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 LINC00574Q9H8X3 128 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 TMEM167BQ9NRX6 74 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 SLC25A10Q9UBX3 287 aaPredicted RBP7.01□□□□□ -1.29
RFX3-202ENST00000358730 SMG1Q96Q15 3661 aaKnown RBP7.01□□□□□ -1.29
RFX3-202ENST00000358730 TEX50A0A1B0GTY4 177 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 OR4A8P0C604 315 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 GNG4P50150 75 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 ERVFC1-1P60608 527 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 HARBI1Q96MB7 349 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 NOL4LQ96MY1 436 aaPredicted RBP7.01□□□□□ -1.29
RFX3-202ENST00000358730 MRPL20Q9BYC9 149 aaKnown RBP7.01□□□□□ -1.29
RFX3-202ENST00000358730 LINC00312Q9Y6C7 94 aa7.01□□□□□ -1.29
RFX3-202ENST00000358730 A8MWP6 167 aa7□□□□□ -1.29
RFX3-202ENST00000358730 K7EM74 188 aa7□□□□□ -1.29
RFX3-202ENST00000358730 APOA2P02652 100 aa7□□□□□ -1.29
RFX3-202ENST00000358730 AREGP15514 252 aa7□□□□□ -1.29
RFX3-202ENST00000358730 CRYBB3P26998 211 aa7□□□□□ -1.29
RFX3-202ENST00000358730 YPEL3P61236 119 aaPredicted RBP7□□□□□ -1.29
RFX3-202ENST00000358730 OR5I1Q13606 314 aa7□□□□□ -1.29
RFX3-202ENST00000358730 TEX36Q5VZQ5 186 aa7□□□□□ -1.29
RFX3-202ENST00000358730 OR10W1Q8NGF6 305 aa7□□□□□ -1.29
RFX3-202ENST00000358730 OR5B3Q8NH48 314 aa7□□□□□ -1.29
RFX3-202ENST00000358730 OR9G1Q8NH87 305 aa7□□□□□ -1.29
RFX3-202ENST00000358730 SLC35E1Q96K37 410 aa7□□□□□ -1.29
RFX3-202ENST00000358730 GAL3ST2Q9H3Q3 398 aa7□□□□□ -1.29
RFX3-202ENST00000358730 FKBP11Q9NYL4 201 aa7□□□□□ -1.29
RFX3-202ENST00000358730 BET1LQ9NYM9 111 aa7□□□□□ -1.29
RFX3-202ENST00000358730 TECRQ9NZ01 308 aaKnown RBP7□□□□□ -1.29
RFX3-202ENST00000358730 ARL2-SNX15V9GYD0 113 aa7□□□□□ -1.29
RFX3-202ENST00000358730 SCGB1D1O95968 90 aa7□□□□□ -1.29
RFX3-202ENST00000358730 CRYABP02511 175 aaKnown RBP7□□□□□ -1.29
RFX3-202ENST00000358730 OR10J4P0C629 311 aa7□□□□□ -1.29
RFX3-202ENST00000358730 RNASE2P10153 161 aaKnown RBP7□□□□□ -1.29
RFX3-202ENST00000358730 CCL3L1P16619 93 aa7□□□□□ -1.29
RFX3-202ENST00000358730 CHRNB4P30926 498 aa7□□□□□ -1.29
RFX3-202ENST00000358730 REG1BP48304 166 aa7□□□□□ -1.29
RFX3-202ENST00000358730 SSX2Q16385 188 aa7□□□□□ -1.29
RFX3-202ENST00000358730 RPEL1Q2QD12 228 aa7□□□□□ -1.29
RFX3-202ENST00000358730 C2orf83Q53S99 150 aa7□□□□□ -1.29
RFX3-202ENST00000358730 TMEM108Q6UXF1 575 aa7□□□□□ -1.29
RFX3-202ENST00000358730 ZNF833PQ6ZTB9 187 aa7□□□□□ -1.29
RFX3-202ENST00000358730 RBMXL3Q8N7X1 1067 aaKnown RBP7□□□□□ -1.29
RFX3-202ENST00000358730 CMTM2Q8TAZ6 248 aa7□□□□□ -1.29
RFX3-202ENST00000358730 LY96Q9Y6Y9 160 aa7□□□□□ -1.29
RFX3-202ENST00000358730 ARFGEF3Q5TH69 2177 aa7□□□□□ -1.29
RFX3-202ENST00000358730 NAV3Q8IVL0 2385 aa7□□□□□ -1.29
RFX3-202ENST00000358730 TRAV9-1A0A075B6T8 112 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 A0A1B0GV90 55 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 NUPR1O60356 82 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 TNFRSF1AP19438 455 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 CEACAM8P31997 349 aaPredicted RBP6.99□□□□□ -1.29
RFX3-202ENST00000358730 TAS2R45P59539 299 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 MLANAQ16655 118 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 ZNF318Q5VUA4 2279 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 PQLC2Q6ZP29 291 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 DOLPP1Q86YN1 238 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 WFDC8Q8IUA0 241 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 ZCCHC24Q8N2G6 241 aaKnown RBP6.99□□□□□ -1.29
RFX3-202ENST00000358730 NUP37Q8NFH4 326 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 OR1L6Q8NGR2 347 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 OR1L8Q8NGR8 309 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 FAM57AQ8TBR7 257 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 COMMD5Q9GZQ3 224 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
RFX3-202ENST00000358730 PKDREJQ9NTG1 2253 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 HELTA6NFD8 242 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 GGTLC3B5MD39 225 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 OR5G3P0C626 314 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 LGALS4P56470 323 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 ZNF600Q6ZNG1 722 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 MMD2Q8IY49 270 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 OSR1Q8TAX0 266 aaPredicted RBP6.99□□□□□ -1.29
RFX3-202ENST00000358730 MS4A10Q96PG2 267 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 PCNX1Q96RV3 2341 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 ZGRF1Q86YA3 2104 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 H0YJW9 148 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 SNRPCP09234 159 aaKnown RBP6.99□□□□□ -1.29
RFX3-202ENST00000358730 IER3P46695 156 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 CD69Q07108 199 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 OR8I2Q8N0Y5 310 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 ZNF714Q96N38 554 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 NDUFAF3Q9BU61 184 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 V9GYV3 84 aa6.99□□□□□ -1.29
RFX3-202ENST00000358730 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
RFX3-202ENST00000358730 FCN1O00602 326 aa6.98□□□□□ -1.29
RFX3-202ENST00000358730 CRISP2P16562 243 aa6.98□□□□□ -1.29
RFX3-202ENST00000358730 ATP5IP56385 69 aaPredicted RBP6.98□□□□□ -1.29
RFX3-202ENST00000358730 SELENOTP62341 195 aa6.98□□□□□ -1.29
RFX3-202ENST00000358730 RPL8P62917 257 aaKnown RBP6.98□□□□□ -1.29
RFX3-202ENST00000358730 USF2Q15853 346 aaPredicted RBP6.98□□□□□ -1.29
RFX3-202ENST00000358730 TIGITQ495A1 244 aa6.98□□□□□ -1.29
RFX3-202ENST00000358730 KRTCAP3Q53RY4 240 aa6.98□□□□□ -1.29
RFX3-202ENST00000358730 OR10X1Q8NGY0 326 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms