RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 ATMQ13315 3056 aa3.33□□□□□ -1.88
CNGA1-201ENST00000358519 ABCA2Q9BZC7 2435 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TLN1Q9Y490 2541 aaKnown RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TRBV20OR9-2A0A075B6H5 130 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 IGKV1D-43A0A0B4J1Z2 117 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 FAM231BA6NCW3 169 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 SLC17A3O00476 420 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 NEURL1O76050 574 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 CRYAAP02489 173 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 CCL4P13236 92 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 HLA-DOBP13765 273 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 UCP1P25874 307 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 CA7P43166 264 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 THBS3P49746 956 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 HERV-K104P61576 105 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 RPS18P62269 152 aaKnown RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF324BQ6AW86 544 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ACSM6Q6P461 480 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TRAT1Q6PIZ9 186 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PET117Q6UWS5 81 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 C1orf122Q6ZSJ8 110 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OR8B12Q8NGG6 310 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OR10G8Q8NGN5 311 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 SLC25A40Q8TBP6 338 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TAF15Q92804 592 aaKnown RBP eCLIP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 POM121L2Q96KW2 1035 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OR4C12Q96R67 309 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 SFXN3Q9BWM7 321 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TTTY12Q9BZ98 90 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PKIBQ9C010 78 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TNRC6AQ8NDV7 1962 aaKnown RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ITPR2Q14571 2701 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 COL12A1Q99715 3063 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TRAV9-1A0A075B6T8 112 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TRBV6-6A0A0A6YYG2 114 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TRGV5A0A0B4J1U4 118 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 C7orf71A4D174 169 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 MBD3L4A6NDZ8 208 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 MBD3L3A6NE82 208 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 MBD3L5A6NJ08 208 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 DEGS1O15121 323 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PDE6DO43924 150 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 DHRS3O75911 302 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PPYP01298 95 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 LINC00869P0C866 280 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 CRYGSP22914 178 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 NPY1RP25929 384 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OTX2P32243 289 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 LGALS4P56470 323 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PLP1P60201 277 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 RHOBP62745 196 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 HBG1P69891 147 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 HBG2P69892 147 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PMP22Q01453 160 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF766Q5HY98 468 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 PLCXD3Q63HM9 321 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM42Q69YG0 159 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 Q6ZS92 163 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 AAED1Q7RTV5 226 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 SFTPA2Q8IWL1 248 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF439Q8NDP4 499 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OR10G9Q8NGN4 311 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OR10G7Q8NGN6 311 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 MBD3L2Q8NHZ7 208 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 OCC1Q8TAD7 63 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 NINJ1Q92982 152 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 APOBEC3DQ96AK3 386 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 Q96M66 194 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 RAB40CQ96S21 281 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 C1QTNF5Q9BXJ0 243 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 QTRT1Q9BXR0 403 aaKnown RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ULBP2Q9BZM5 246 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 IL36BQ9NZH7 164 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 THYN1Q9P016 225 aa3.32□□□□□ -1.88
CNGA1-201ENST00000358519 ERRFI1Q9UJM3 462 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 SETD2Q9BYW2 2564 aaPredicted RBP3.32□□□□□ -1.88
CNGA1-201ENST00000358519 FER1L5A0AVI2 2057 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 TRBV9A0A0B4J1U6 114 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 A0A0G2JRQ6 117 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF816-ZNF321PA0A0X1KG74 233 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 UBE2L5PA0A1B0GUS4 154 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 SLC22A20A6NK97 555 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 SPINK4O60575 86 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 SERPINE2P07093 398 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 OR10J4P0C629 311 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 SMIM17P0DL12 118 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 CCL3P10147 92 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 IAPPP10997 89 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 COX5AP20674 150 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 GNLYP22749 145 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 SRIP30626 198 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 SSTR5P35346 364 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 MEOX1P50221 254 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF121P58317 390 aaPredicted RBP3.31□□□□□ -1.88
CNGA1-201ENST00000358519 HTD2P86397 168 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 PLP2Q04941 152 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 MALLQ13021 153 aa3.31□□□□□ -1.88
CNGA1-201ENST00000358519 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms