RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GAGE1Q13065 139 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 TMEM95Q3KNT9 176 aa7.48□□□□□ -1.21
COL6A6-201ENST00000358511 SLC25A10Q9UBX3 287 aaPredicted RBP7.48□□□□□ -1.21
COL6A6-201ENST00000358511 TRBV20OR9-2A0A075B6H5 130 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 KLK10O43240 276 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 IGHV4-34P06331 123 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 IL11P20809 199 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 TDGF1P3P51864 188 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 TFF3Q07654 80 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 SRSF4Q08170 494 aaKnown RBP7.47□□□□□ -1.21
COL6A6-201ENST00000358511 BHLHA15Q7RTS1 189 aaPredicted RBP7.47□□□□□ -1.21
COL6A6-201ENST00000358511 KLK15Q9H2R5 256 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 TCF19Q9Y242 345 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 CYSLTR1Q9Y271 337 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 DSCAML1Q8TD84 2053 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 TRBV6-7A0A0A0MS04 114 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 AGFG2O95081 481 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 CGAP01215 116 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 DNM1P46Q6ZS02 220 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 GCSAMQ8N6F7 178 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 MS4A6AQ9H2W1 248 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 RNF7Q9UBF6 113 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 SRFP11831 508 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 PSG4Q00888 419 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 SPINK14Q6IE38 97 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 INO80CQ6PI98 192 aaPredicted RBP7.47□□□□□ -1.21
COL6A6-201ENST00000358511 OR9G4Q8NGQ1 327 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 OR10J6PQ8NGY7 276 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
COL6A6-201ENST00000358511 NPIPB6E9PJ23 425 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 HTN3P15516 51 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 RPL32P62910 135 aaKnown RBP7.47□□□□□ -1.21
COL6A6-201ENST00000358511 FHL5Q5TD97 284 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 CITED1Q99966 193 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 FOXL1Q12952 345 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 SEMA5BQ9P283 1151 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 TRAV30A0A087WSZ9 112 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 FBXW9Q5XUX1 488 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 LINC00305Q7Z4B0 112 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 ZNF385AQ96PM9 386 aaKnown RBP7.47□□□□□ -1.21
COL6A6-201ENST00000358511 WDR87Q6ZQQ6 2873 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 A0A1W2PRD5 423 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 A0A1W2PRF3 423 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 A0A1W2PRM7 423 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 CEACAM1P13688 526 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 TSPOP30536 169 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 MC5RP33032 325 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 SLX1AQ9BQ83 275 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 DLL3Q9NYJ7 618 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
COL6A6-201ENST00000358511 IGHV3-21A0A0B4J1V1 117 aa7.46□□□□□ -1.21
COL6A6-201ENST00000358511 TRAV17A0A0B4J275 112 aa7.46□□□□□ -1.21
COL6A6-201ENST00000358511 IL9P15248 144 aa7.46□□□□□ -1.21
COL6A6-201ENST00000358511 VKORC1L1Q8N0U8 176 aa7.46□□□□□ -1.21
COL6A6-201ENST00000358511 MGST3O14880 152 aa7.46□□□□□ -1.21
COL6A6-201ENST00000358511 APOBEC4Q8WW27 367 aaKnown RBP7.46□□□□□ -1.21
COL6A6-201ENST00000358511 IGHV3OR15-7A0A075B7D8 119 aa7.46□□□□□ -1.21
COL6A6-201ENST00000358511 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.21
COL6A6-201ENST00000358511 ARHGAP32A7KAX9 2087 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 TIMP3P35625 211 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 RNASE7Q9H1E1 156 aaKnown RBP7.46□□□□□ -1.22
COL6A6-201ENST00000358511 SS18L1O75177 396 aaPredicted RBP7.46□□□□□ -1.22
COL6A6-201ENST00000358511 IGKV1D-42A0A075B6H8 117 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 GPR6P46095 362 aaPredicted RBP7.46□□□□□ -1.22
COL6A6-201ENST00000358511 DRAM1Q8N682 238 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 IGFBP3P17936 291 aaPredicted RBP7.46□□□□□ -1.22
COL6A6-201ENST00000358511 CCL20P78556 96 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF585BQ52M93 769 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 MDP1Q86V88 176 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF664Q8N3J9 261 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 C16orf92Q96LL3 132 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 ODAMA1E959 279 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 RND2P52198 227 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 CCDC144NLQ6NUI1 221 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 ZNF525Q8N782 197 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 RAB1BQ9H0U4 201 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 GTSF1LQ9H1H1 148 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 PLA2G3Q9NZ20 509 aa7.46□□□□□ -1.22
COL6A6-201ENST00000358511 IL6RP08887 468 aaPredicted RBP7.45□□□□□ -1.22
COL6A6-201ENST00000358511 CCL3P10147 92 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 ATP5G3P48201 142 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 CIARTQ8N365 385 aaPredicted RBP7.45□□□□□ -1.22
COL6A6-201ENST00000358511 KBTBD11-OT1A0A1B0GTJ5 212 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 ADRA2AP08913 450 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
COL6A6-201ENST00000358511 REG1BP48304 166 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 CX3CL1P78423 397 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 GPR82Q96P67 336 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 DIRC2Q96SL1 478 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 LINC00470Q9BZP3 86 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 MPV17P39210 176 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 ERVK11-1P61568 191 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 ZXDCQ2QGD7 858 aaPredicted RBP7.45□□□□□ -1.22
COL6A6-201ENST00000358511 TMEM30BQ3MIR4 351 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 GAGE2BQ13066 116 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 GAGE2EQ4V326 116 aa7.45□□□□□ -1.22
COL6A6-201ENST00000358511 OCIAD2Q56VL3 154 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms