RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 RCC1LQ96I51 464 aaKnown RBP7.33□□□□□ -1.24
UPF2-202ENST00000357604 BIN3Q9NQY0 253 aa7.33□□□□□ -1.24
UPF2-202ENST00000357604 ORM2P19652 201 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.32□□□□□ -1.24
UPF2-202ENST00000357604 TMEM116Q8NCL8 245 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 UBE2E2Q96LR5 201 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 INTS1Q8N201 2190 aaKnown RBP7.32□□□□□ -1.24
UPF2-202ENST00000357604 SIX6O95475 246 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 INSL3P51460 131 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 EBI3Q14213 229 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 OR8I2Q8N0Y5 310 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 ACACBO00763 2458 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 TSPAN4O14817 238 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 CGB3P0DN86 165 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 CGB7P0DN87 165 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 RELBQ01201 579 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 RAB32Q13637 225 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 PPP1R1CQ8WVI7 109 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 ZNF747Q9BV97 191 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 CLEC5AQ9NY25 188 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 DYSFO75923 2080 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 TRAV14DV4A0A0A6YYC5 116 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 METTL15P1P0C7V9 234 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 OR2G3Q8NGZ4 309 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 BORCS7Q96B45 105 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 HSPB11Q9Y547 144 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 SPTA1P02549 2419 aa7.32□□□□□ -1.24
UPF2-202ENST00000357604 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
UPF2-202ENST00000357604 RPL7P18124 248 aaKnown RBP7.31□□□□□ -1.24
UPF2-202ENST00000357604 PAX2Q02962 417 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 LYRM2Q9NU23 88 aaPredicted RBP7.31□□□□□ -1.24
UPF2-202ENST00000357604 LINC00527Q9UJ94 153 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 PCNX3Q9H6A9 2034 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 RAB5CP51148 216 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 MRPL32Q9BYC8 188 aaKnown RBP7.31□□□□□ -1.24
UPF2-202ENST00000357604 FAM24AA6NFZ4 105 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 SEC14L6B5MCN3 397 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 CCL24O00175 119 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 TGOLN2O43493 480 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 FFAR4Q5NUL3 377 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 PRR31Q5SQ13 230 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 ZNF329Q86UD4 541 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 IGF2RP11717 2491 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 H3BP45 60 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 ADAP1O75689 374 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 IGHV3-23P01764 117 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 SPP1P10451 314 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 CNTFRP26992 372 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 TSPOP30536 169 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 Q8N9W7 124 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 ELLP55199 621 aaPredicted RBP7.31□□□□□ -1.24
UPF2-202ENST00000357604 DLX1P56177 255 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 OR5C1Q8NGR4 320 aa7.31□□□□□ -1.24
UPF2-202ENST00000357604 MKI67P46013 3256 aaKnown RBP7.3□□□□□ -1.24
UPF2-202ENST00000357604 DIAPH2-AS1Q14236 149 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 TIGITQ495A1 244 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 BTNL8Q6UX41 500 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 IL34Q6ZMJ4 242 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 CYP2G1PQ6ZSU1 146 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 OR11H1Q8NG94 326 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 NOL4LQ96MY1 436 aaPredicted RBP7.3□□□□□ -1.24
UPF2-202ENST00000357604 TMEM167BQ9NRX6 74 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 PRR13Q9NZ81 148 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 PLA2G10O15496 165 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 OR7C2O60412 319 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 MPC2O95563 127 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 IGKV1-16P04430 117 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 OXA1LQ15070 435 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 KLF17Q5JT82 389 aaPredicted RBP7.3□□□□□ -1.24
UPF2-202ENST00000357604 Q6ZSV7 163 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.3□□□□□ -1.24
UPF2-202ENST00000357604 UMAD1C9J7I0 102 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 MDKP21741 143 aaPredicted RBP7.3□□□□□ -1.24
UPF2-202ENST00000357604 EWSR1Q01844 656 aaKnown RBP eCLIP7.3□□□□□ -1.24
UPF2-202ENST00000357604 HSPB7Q9UBY9 170 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 ARL16Q0P5N6 197 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 WFDC3Q8IUB2 231 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 OR10J6PQ8NGY7 276 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 NDUFA4L2Q9NRX3 87 aa7.3□□□□□ -1.24
UPF2-202ENST00000357604 HEATR1Q9H583 2144 aaKnown RBP7.29□□□□□ -1.24
UPF2-202ENST00000357604 AGPAT2O15120 278 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 DPPA3Q6W0C5 159 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 GPHA2Q96T91 129 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 PARP12Q9H0J9 701 aaKnown RBP7.29□□□□□ -1.24
UPF2-202ENST00000357604 TMEM14BQ9NUH8 114 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 NDUFA4O00483 81 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 CST7O76096 145 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 TUSC1Q2TAM9 212 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 DAZAP1Q96EP5 407 aaKnown RBP7.29□□□□□ -1.24
UPF2-202ENST00000357604 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 SLC25A22Q9H936 323 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 ZNF702PQ9H963 129 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 UBQLN2Q9UHD9 624 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 UBE2G1P62253 170 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 LDLRAD2Q5SZI1 272 aa7.29□□□□□ -1.24
UPF2-202ENST00000357604 ODF3L1Q8IXM7 274 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms