RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 MSGN1A6NI15 193 aa13.56□□□□□ -0.24
RXRA-201ENST00000356384 ZP1P60852 638 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 ORMDL3Q8N138 153 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 Q9H3A6 140 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 CEP290O15078 2479 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 SLC25A20O43772 301 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 EFEMP2O95967 443 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 CD8AP01732 235 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 CLDN16Q9Y5I7 305 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 OR10J3Q5JRS4 329 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 OR4X2Q8NGF9 303 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 OR13A1Q8NGR1 328 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 GLMPQ8WWB7 406 aa13.55□□□□□ -0.24
RXRA-201ENST00000356384 H3BUT2 72 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
RXRA-201ENST00000356384 GLRXP35754 106 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 CIARTQ8N365 385 aaPredicted RBP13.54□□□□□ -0.24
RXRA-201ENST00000356384 MRPL20Q9BYC9 149 aaKnown RBP13.54□□□□□ -0.24
RXRA-201ENST00000356384 EGR4Q05215 589 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 FDCSPQ8NFU4 85 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 ZNF703Q9H7S9 590 aaPredicted RBP13.54□□□□□ -0.24
RXRA-201ENST00000356384 SRP19P09132 144 aaKnown RBP13.54□□□□□ -0.24
RXRA-201ENST00000356384 RFPL3SP0C7P2 107 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 PAX2Q02962 417 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 CCDC88CQ9P219 2028 aa13.54□□□□□ -0.24
RXRA-201ENST00000356384 CECR9P0C854 216 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 TRIP11Q15643 1979 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 RAMP1O60894 148 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 IZUMO1RA6ND01 250 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 CELA3AP09093 270 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
RXRA-201ENST00000356384 GREB1LQ9C091 1923 aaPredicted RBP13.53□□□□□ -0.24
RXRA-201ENST00000356384 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 PAX1P15863 534 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 Q5PR19 223 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 TMEM42Q69YG0 159 aa13.53□□□□□ -0.24
RXRA-201ENST00000356384 TRAV21A0A0B4J279 112 aa13.52□□□□□ -0.24
RXRA-201ENST00000356384 J3QW42 95 aa13.52□□□□□ -0.24
RXRA-201ENST00000356384 TIAF1O95411 115 aa13.52□□□□□ -0.24
RXRA-201ENST00000356384 CD7P09564 240 aa13.52□□□□□ -0.24
RXRA-201ENST00000356384 VCX2Q9H322 139 aa13.52□□□□□ -0.24
RXRA-201ENST00000356384 GDF15Q99988 308 aa13.52□□□□□ -0.24
RXRA-201ENST00000356384 TM4SF5O14894 197 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 CTHRC1Q96CG8 243 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 JMJD8Q96S16 334 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 LTBP1Q14766 1721 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 A0A1B0GW15 77 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 SMIM10L1P0DMW3 83 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 GNG5P63218 68 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 SMIM10Q96HG1 83 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 PQLC2LA1A4F0 135 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.52□□□□□ -0.25
RXRA-201ENST00000356384 SPSB2Q99619 263 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 VKORC1Q9BQB6 163 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 DPH3P1Q9H4G8 78 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 PRDM13Q9H4Q3 707 aa13.52□□□□□ -0.25
RXRA-201ENST00000356384 SNRNP200O75643 2136 aaKnown RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 KBTBD11-OT1A0A1B0GTJ5 212 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 Q6AWC8 147 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 C7orf69Q9H7B7 122 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 NHP2Q9NX24 153 aaKnown RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 SIGLEC12Q96PQ1 595 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 CFHR5Q9BXR6 569 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 RBBP6Q7Z6E9 1792 aaKnown RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 PGPEP1LA6NFU8 196 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 PRB3Q04118 309 aaPredicted RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 SSBP4Q9BWG4 385 aaPredicted RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 ZFC3H1O60293 1989 aaKnown RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 IFI27P40305 119 aaPredicted RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 ST20Q9HBF5 79 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 IFI6P09912 130 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 PPP1R32Q7Z5V6 425 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 FAM168AQ92567 244 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 RNASE7Q9H1E1 156 aaKnown RBP13.51□□□□□ -0.25
RXRA-201ENST00000356384 MEGF9Q9H1U4 602 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 ZNF257Q9Y2Q1 563 aa13.51□□□□□ -0.25
RXRA-201ENST00000356384 RTN4RL2Q86UN3 420 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 C5orf30Q96GV9 206 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 FOXD3Q9UJU5 478 aaPredicted RBP13.5□□□□□ -0.25
RXRA-201ENST00000356384 CARHSP1Q9Y2V2 147 aaKnown RBP13.5□□□□□ -0.25
RXRA-201ENST00000356384 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 SAMD13Q5VXD3 122 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 SERF1AO75920 110 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 STHQ8IWL8 128 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 PEMTQ9UBM1 199 aa13.5□□□□□ -0.25
RXRA-201ENST00000356384 UCP1P25874 307 aa13.49□□□□□ -0.25
RXRA-201ENST00000356384 FNDC4Q9H6D8 234 aaPredicted RBP13.49□□□□□ -0.25
RXRA-201ENST00000356384 GSN-AS1Q9NRJ2 163 aa13.49□□□□□ -0.25
RXRA-201ENST00000356384 EIF4EBP2Q13542 120 aaPredicted RBP13.49□□□□□ -0.25
RXRA-201ENST00000356384 TM2D1Q9BX74 207 aa13.49□□□□□ -0.25
RXRA-201ENST00000356384 TRAV2A0A0B4J234 112 aa13.49□□□□□ -0.25
RXRA-201ENST00000356384 FBLN7Q53RD9 439 aa13.49□□□□□ -0.25
RXRA-201ENST00000356384 RTBDNQ9BSG5 229 aaPredicted RBP13.49□□□□□ -0.25
RXRA-201ENST00000356384 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
RXRA-201ENST00000356384 NEU4Q8WWR8 484 aaPredicted RBP13.49□□□□□ -0.25
RXRA-201ENST00000356384 CABIN1Q9Y6J0 2220 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms