RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FAM206AQ9NX38 181 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 IGKV1D-42A0A075B6H8 117 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 CYP2G1PQ6ZSU1 146 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 Q71RC1 249 aaPredicted RBP14.67□□□□□ -0.06
COL27A1-201ENST00000356083 SLC25A28Q96A46 364 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 LEPP41159 167 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 SRSF4Q08170 494 aaKnown RBP14.67□□□□□ -0.06
COL27A1-201ENST00000356083 ZIC1Q15915 447 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 NAPSAO96009 420 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 OR13A1Q8NGR1 328 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 SEPSECSQ9HD40 501 aaKnown RBP14.67□□□□□ -0.06
COL27A1-201ENST00000356083 ZNF562Q6V9R5 426 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 PAX4O43316 350 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 C1QAP02745 245 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 NBEAP1P0C6P0 100 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 SFXN3Q9BWM7 321 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 DMKNQ6E0U4 476 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-201ENST00000356083 PSME4Q14997 1843 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 CTAG1AP78358 180 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 CLPPQ16740 277 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-201ENST00000356083 LEMD1Q68G75 181 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 SDHCQ99643 169 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-201ENST00000356083 CRIM1Q9NZV1 1036 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 FOXJ2Q9P0K8 574 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 FBLN7Q53RD9 439 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 COQ2Q96H96 371 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 EREGO14944 169 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 TMEM186Q96B77 213 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 PRSS22Q9GZN4 317 aa14.66□□□□□ -0.06
COL27A1-201ENST00000356083 CXorf51AA0A1B0GTR3 108 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 MT-ND6P03923 174 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 KLF4O43474 513 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 FAM27BQ5VT28 67 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 LOC101059948A0A1B0GTJ6 334 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 CD28P10747 220 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 HOGA1Q86XE5 327 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 GPR146Q96CH1 333 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 ZNF818PQ6ZRF7 136 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 CREBBPQ92793 2442 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
COL27A1-201ENST00000356083 ZNF236Q9UL36 1845 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 CEACAM8P31997 349 aaPredicted RBP14.65□□□□□ -0.06
COL27A1-201ENST00000356083 SIGLEC12Q96PQ1 595 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 CBLN4Q9NTU7 201 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 DPM3Q9P2X0 92 aa14.65□□□□□ -0.06
COL27A1-201ENST00000356083 ABHD17AQ96GS6 310 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 CGAP01215 116 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 FAM19A2Q8N3H0 131 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 NEUROG1Q92886 237 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 F8WEM9 126 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 EFEMP2O95967 443 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 ZNF146Q15072 292 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 TCF19Q9Y242 345 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 IGLV3-16A0A075B6K0 115 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 A0A1B0GV90 55 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 DPRXA6NFQ7 191 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 APCDD1LQ8NCL9 501 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 PRADC1Q9BSG0 188 aa14.64□□□□□ -0.07
COL27A1-201ENST00000356083 H0YL77 283 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 MALRD1Q5VYJ5 2156 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 IL6RP08887 468 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-201ENST00000356083 RAG2P55895 527 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TMEM155Q4W5P6 130 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TMEM252Q8N6L7 170 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TMEM52Q8NDY8 209 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 C21orf62Q9NYP8 219 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 RBBP6Q7Z6E9 1792 aaKnown RBP14.63□□□□□ -0.07
COL27A1-201ENST00000356083 SLC22A18ASQ8N1D0 253 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 DRAM1Q8N682 238 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 PTGDSP41222 190 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TMEM219Q86XT9 240 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 ST20Q9HBF5 79 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TRAV40A0A0B4J280 105 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 SLC17A3O00476 420 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TCF23Q7RTU1 214 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 LOXL4Q96JB6 756 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 COX11Q9Y6N1 276 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 ZCCHC24Q8N2G6 241 aaKnown RBP14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TMEM54Q969K7 222 aa14.63□□□□□ -0.07
COL27A1-201ENST00000356083 TET2Q6N021 2002 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-201ENST00000356083 SRXN1Q9BYN0 137 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 TOMM40O96008 361 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 SMIM6P0DI80 62 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 FER1L6-AS1Q8NA97 138 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 CTDSPLO15194 276 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 IGKV1D-16P01601 117 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 MYOD1P15172 320 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 ZNF79Q15937 498 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 CD300CQ08708 224 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 C1orf122Q6ZSJ8 110 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 UBE2E2Q96LR5 201 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 LILRA6Q6PI73 481 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 ZNF501Q96CX3 271 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-201ENST00000356083 SELENOHQ8IZQ5 122 aaKnown RBP14.62□□□□□ -0.07
COL27A1-201ENST00000356083 ANAPC10Q9UM13 185 aa14.62□□□□□ -0.07
COL27A1-201ENST00000356083 LHFPL4Q7Z7J7 247 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 NCOA6Q14686 2063 aaPredicted RBP14.61□□□□□ -0.07
COL27A1-201ENST00000356083 NHSQ6T4R5 1651 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 CENPVL1A0A0U1RR11 272 aa14.61□□□□□ -0.07
COL27A1-201ENST00000356083 KIAA0040Q15053 153 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms