RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TWIST1Q15672 202 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 CYP2G1PQ6ZSU1 146 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 IL17RELQ6ZVW7 336 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 DMRTC2Q8IXT2 367 aaPredicted RBP8.05□□□□□ -1.12
GABPA-201ENST00000354828 TEX45Q8NA69 505 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 OR10C1Q96KK4 312 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 DUX3Q96PT4 197 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 LINC01587Q99440 93 aa8.05□□□□□ -1.12
GABPA-201ENST00000354828 LYRM2Q9NU23 88 aaPredicted RBP8.05□□□□□ -1.12
GABPA-201ENST00000354828 PSPNO60542 156 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 PMCHP20382 165 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 RPS11P62280 158 aaKnown RBP eCLIP8.04□□□□□ -1.12
GABPA-201ENST00000354828 TCEAL7Q9BRU2 100 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 GTF3C1Q12789 2109 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 IGHV1-3A0A0C4DH29 117 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 IGKV1-12A0A0C4DH73 117 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 IGKV1D-12P01611 117 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 DLK1P80370 383 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 LAIR2Q6ISS4 152 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 MRPL54Q6P161 138 aaKnown RBP8.04□□□□□ -1.12
GABPA-201ENST00000354828 TMEM37Q8WXS4 190 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 ST6GAL2Q96JF0 529 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 KLF2Q9Y5W3 355 aaPredicted RBP8.04□□□□□ -1.12
GABPA-201ENST00000354828 OR4C46A6NHA9 309 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 CD74P04233 296 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 FAM74A4Q5TZK3 123 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 TEX38Q6PEX7 206 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 OR11H7Q8NGC8 314 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 LHFPL5Q8TAF8 219 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 SPSB4Q96A44 273 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 NPDC1Q9NQX5 325 aaPredicted RBP8.04□□□□□ -1.12
GABPA-201ENST00000354828 SEC11BP0C7V7 166 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 ZNF585BQ52M93 769 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 LCNL1Q6ZST4 164 aa8.04□□□□□ -1.12
GABPA-201ENST00000354828 TBL2Q9Y4P3 447 aaKnown RBP8.04□□□□□ -1.12
GABPA-201ENST00000354828 TRAV14DV4A0A0A6YYC5 116 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 C9JCJ5 164 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 HSPB1P04792 205 aaKnown RBP8.03□□□□□ -1.12
GABPA-201ENST00000354828 GATAD1Q8WUU5 269 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 NPIPB6E9PJ23 425 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 IGFL2Q6UWQ7 119 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 SGK494Q96LW2 274 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
GABPA-201ENST00000354828 TCF21O43680 179 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 PRSS1P07477 247 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 PRTN3P24158 256 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 SRSF7Q16629 238 aaKnown RBP eCLIP8.03□□□□□ -1.12
GABPA-201ENST00000354828 HIST3H3Q16695 136 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 SHISA3A0PJX4 238 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 C5orf63A6NC05 138 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 OR5AL1P0C617 328 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 MFAP2P55001 183 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 CD81P60033 236 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 WDR73Q6P4I2 378 aa8.03□□□□□ -1.12
GABPA-201ENST00000354828 PNRC2Q9NPJ4 139 aaKnown RBP8.03□□□□□ -1.12
GABPA-201ENST00000354828 PHF3Q92576 2039 aaKnown RBP8.02□□□□□ -1.12
GABPA-201ENST00000354828 HELZP42694 1942 aaKnown RBP8.02□□□□□ -1.12
GABPA-201ENST00000354828 C7orf66A4D0T2 115 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 TSTD3H0UI37 97 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 ANOS1P23352 680 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 ICAM4Q14773 271 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 TMEM88Q6PEY1 159 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 GOLT1AQ6ZVE7 132 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 PIP4P2Q8N4L2 257 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 KIF26AQ9ULI4 1882 aaPredicted RBP8.02□□□□□ -1.13
GABPA-201ENST00000354828 DOCK10Q96BY6 2186 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 AGAP20933 346 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 KRTDAPP60985 99 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 UQCC3Q6UW78 93 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 TMEM167AQ8TBQ9 72 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 RNASEH2CQ8TDP1 164 aaKnown RBP8.02□□□□□ -1.13
GABPA-201ENST00000354828 C19orf24Q9BVV8 132 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 RPRMQ9NS64 109 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 IGKV1D-13A0A0B4J2D9 117 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 IGKV1-13P0DP09 117 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 UCP1P25874 307 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 PAX8Q06710 450 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 SELENOKQ9Y6D0 94 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 IGKV1D-17A0A075B6S4 117 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 IGKV1-27A0A075B6S5 117 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 BUB1B-PAK6H3BSN5 160 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 EIF3GO75821 320 aaKnown RBP eCLIP8.02□□□□□ -1.13
GABPA-201ENST00000354828 FAM53AQ6NSI3 398 aaPredicted RBP8.02□□□□□ -1.13
GABPA-201ENST00000354828 GALNT14Q96FL9 552 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 SEC11CQ9BY50 192 aa8.02□□□□□ -1.13
GABPA-201ENST00000354828 MRPL32Q9BYC8 188 aaKnown RBP8.02□□□□□ -1.13
GABPA-201ENST00000354828 F8VVB4 439 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 F8VWA3 439 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 RND3P61587 244 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 HIST1H3AP68431 136 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 DPPA3Q6W0C5 159 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 Q6ZN92 141 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 ZNF600Q6ZNG1 722 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 CBY3A6NI87 242 aa8.01□□□□□ -1.13
GABPA-201ENST00000354828 GGCTO75223 188 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms