RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
SCN8A-201ENST00000354534 GTSCR1Q86UQ5 136 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 LEAP2Q969E1 77 aa6.87□□□□□ -1.31
SCN8A-201ENST00000354534 KCNE1BA0A087WTH5 132 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 A0A1W2PPI3 338 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 OR2H2O95918 312 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 CCL8P80075 99 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 ALS2Q96Q42 1657 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 ODAMA1E959 279 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 NBEAP1P0C6P0 100 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 GATAD1Q8WUU5 269 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 DEFB104AQ8WTQ1 72 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 S4R3C0 116 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 A0A087X0K7 114 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 TRAV25A0A0B4J276 109 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 A0A1W2PRX2 142 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 NTN1O95631 604 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 NPIPB3Q92617 1050 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 ST6GALNAC2Q9UJ37 374 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 BCL6BQ8N143 479 aaPredicted RBP6.86□□□□□ -1.31
SCN8A-201ENST00000354534 RNASE7Q9H1E1 156 aaKnown RBP6.86□□□□□ -1.31
SCN8A-201ENST00000354534 J3QT63 122 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 C1orf174Q8IYL3 243 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 ABHD17AQ96GS6 310 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM222Q9H0R3 208 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 SOCS3O14543 225 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 CA7P43166 264 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 HAMPP81172 84 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 DMKNQ6E0U4 476 aaPredicted RBP6.86□□□□□ -1.31
SCN8A-201ENST00000354534 FAM219BQ5XKK7 198 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 MRPS18BQ9Y676 258 aaKnown RBP6.86□□□□□ -1.31
SCN8A-201ENST00000354534 RGPD4Q7Z3J3 1758 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 IGHG3P01860 377 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 FOXL1Q12952 345 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 LDLRAD1Q5T700 205 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 TNFRSF12AQ9NP84 129 aa6.86□□□□□ -1.31
SCN8A-201ENST00000354534 PAX1P15863 534 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 TRA2AQ13595 282 aaKnown RBP eCLIP6.85□□□□□ -1.31
SCN8A-201ENST00000354534 CHCHD5Q9BSY4 110 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 PLA2G10O15496 165 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 HS3ST3B1Q9Y662 390 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 MYLKQ15746 1914 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 VENTXO95231 258 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ZP1P60852 638 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 C2orf68Q2NKX9 166 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ATP5L2Q7Z4Y8 100 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 DDX60LQ5H9U9 1706 aaKnown RBP6.85□□□□□ -1.31
SCN8A-201ENST00000354534 MARCH11A6NNE9 402 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 PRRT4C9JH25 899 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 DSCR8Q96T75 97 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 SIPA1L3O60292 1781 aaPredicted RBP6.85□□□□□ -1.31
SCN8A-201ENST00000354534 MAGEA5P43359 124 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 PPP1R27Q86WC6 154 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 GDF15Q99988 308 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ZFP64Q9NPA5 681 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 PGLYRP1O75594 196 aaPredicted RBP6.85□□□□□ -1.31
SCN8A-201ENST00000354534 TRGV3P03979 118 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ZNF146Q15072 292 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 GAGE7O76087 117 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ZNRF1Q8ND25 227 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 ARFGEF1Q9Y6D6 1849 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 RPL34P49207 117 aaKnown RBP6.85□□□□□ -1.31
SCN8A-201ENST00000354534 FAM57AQ8TBR7 257 aa6.85□□□□□ -1.31
SCN8A-201ENST00000354534 SF3B5Q9BWJ5 86 aaKnown RBP6.85□□□□□ -1.31
SCN8A-201ENST00000354534 DLEU1O43261 78 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 IGLV3-27P01718 113 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 EGR4Q05215 589 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 ASPHD2Q6ICH7 369 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 SS18L2Q9UHA2 77 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 CDC42EP2O14613 210 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 UBE2E2Q96LR5 201 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 SCN7AQ01118 1682 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 A0A1W2PQF6 199 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 CHAC1Q9BUX1 264 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 FOXA2Q9Y261 457 aaPredicted RBP6.84□□□□□ -1.31
SCN8A-201ENST00000354534 LHX2P50458 406 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 ORMDL2Q53FV1 153 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 WNT2P09544 360 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 NOVP48745 357 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 MPTX1A8MV57 137 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 Q6AWC8 147 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.31
SCN8A-201ENST00000354534 UBE2V1Q13404 147 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 LAGE3Q14657 143 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 ATP6V0BQ99437 205 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 IDI2-AS1Q9NZ38 188 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 ERVH48-1M5A8F1 160 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 SHISA5Q8N114 240 aa6.84□□□□□ -1.31
SCN8A-201ENST00000354534 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms