RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 WFDC11Q8NEX6 87 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 SRSF12Q8WXF0 261 aaKnown RBP16.37■□□□□ 0.21
TRIM4-202ENST00000354241 PARD6GQ9BYG4 376 aaPredicted RBP16.37■□□□□ 0.21
TRIM4-202ENST00000354241 FAM96BQ9Y3D0 163 aa16.37■□□□□ 0.21
TRIM4-202ENST00000354241 FGF7P21781 194 aa16.36■□□□□ 0.21
TRIM4-202ENST00000354241 SSBP2P81877 361 aaPredicted RBP16.36■□□□□ 0.21
TRIM4-202ENST00000354241 VWC2Q2TAL6 325 aa16.36■□□□□ 0.21
TRIM4-202ENST00000354241 TAF15Q92804 592 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIM4-202ENST00000354241 SOX21Q9Y651 276 aaPredicted RBP16.36■□□□□ 0.21
TRIM4-202ENST00000354241 GCN1Q92616 2671 aaKnown RBP16.36■□□□□ 0.21
TRIM4-202ENST00000354241 IGLC7A0M8Q6 106 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 ATP5IP56385 69 aaPredicted RBP16.35■□□□□ 0.21
TRIM4-202ENST00000354241 DLK1P80370 383 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 COMMD7Q86VX2 200 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 GGACTQ9BVM4 153 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 TEX46H3BTG2 121 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 C1RLQ9NZP8 487 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 FBXO7Q9Y3I1 522 aa16.35■□□□□ 0.21
TRIM4-202ENST00000354241 SVEP1Q4LDE5 3571 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
TRIM4-202ENST00000354241 TEX22C9J3V5 150 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 PRH1P02810 166 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 AREGP15514 252 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 SUB1P53999 127 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM4-202ENST00000354241 ABHD5Q8WTS1 349 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 SSMEM1Q8WWF3 244 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 P2RX4Q99571 388 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 MEGF9Q9H1U4 602 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 PFDN2Q9UHV9 154 aa16.34■□□□□ 0.21
TRIM4-202ENST00000354241 FXYD3Q14802 87 aa16.33■□□□□ 0.21
TRIM4-202ENST00000354241 CYB5R2Q6BCY4 276 aa16.33■□□□□ 0.21
TRIM4-202ENST00000354241 NAV3Q8IVL0 2385 aa16.33■□□□□ 0.2
TRIM4-202ENST00000354241 MAP1AP78559 2803 aaPredicted RBP16.33■□□□□ 0.2
TRIM4-202ENST00000354241 Q6ZRG5 221 aa16.33■□□□□ 0.2
TRIM4-202ENST00000354241 Q8N9W7 124 aa16.33■□□□□ 0.2
TRIM4-202ENST00000354241 SAT2Q96F10 170 aaPredicted RBP16.33■□□□□ 0.2
TRIM4-202ENST00000354241 CITED4Q96RK1 184 aa16.33■□□□□ 0.2
TRIM4-202ENST00000354241 FBP1P09467 338 aa16.32■□□□□ 0.2
TRIM4-202ENST00000354241 CAMLGP49069 296 aa16.32■□□□□ 0.2
TRIM4-202ENST00000354241 RAB5CP51148 216 aa16.32■□□□□ 0.2
TRIM4-202ENST00000354241 ARSJQ5FYB0 599 aaPredicted RBP16.32■□□□□ 0.2
TRIM4-202ENST00000354241 AKR1C8PQ5T2L2 129 aa16.32■□□□□ 0.2
TRIM4-202ENST00000354241 BTNL8Q6UX41 500 aa16.32■□□□□ 0.2
TRIM4-202ENST00000354241 SSX3Q99909 188 aa16.32■□□□□ 0.2
TRIM4-202ENST00000354241 PSMG3Q9BT73 122 aaPredicted RBP16.32■□□□□ 0.2
TRIM4-202ENST00000354241 BLOC1S1P78537 153 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 PXDC1Q5TGL8 231 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 RASL11BQ9BPW5 248 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 FAM103A1Q9BTL3 118 aaKnown RBP16.31■□□□□ 0.2
TRIM4-202ENST00000354241 WDR83OSQ9Y284 106 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 UMAD1C9J7I0 102 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 SMAD7O15105 426 aaKnown RBP16.31■□□□□ 0.2
TRIM4-202ENST00000354241 MDKP21741 143 aaPredicted RBP16.31■□□□□ 0.2
TRIM4-202ENST00000354241 FHITP49789 147 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 CX3CL1P78423 397 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 AKR1C1Q04828 323 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 TREML4Q6UXN2 200 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 C19orf35Q6ZS72 473 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 HSD17B13Q7Z5P4 300 aaPredicted RBP16.31■□□□□ 0.2
TRIM4-202ENST00000354241 CIARTQ8N365 385 aaPredicted RBP16.31■□□□□ 0.2
TRIM4-202ENST00000354241 ZNF709Q8N972 641 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 FAM213BQ8TBF2 198 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 FOXC2Q99958 501 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 NPCDR1Q9BY65 106 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 NPVFQ9HCQ7 196 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 TIMM9Q9Y5J7 89 aa16.31■□□□□ 0.2
TRIM4-202ENST00000354241 ZNF616Q08AN1 781 aa16.3■□□□□ 0.2
TRIM4-202ENST00000354241 ZNF562Q6V9R5 426 aa16.3■□□□□ 0.2
TRIM4-202ENST00000354241 TMEM219Q86XT9 240 aa16.3■□□□□ 0.2
TRIM4-202ENST00000354241 ARPC1AQ92747 370 aa16.3■□□□□ 0.2
TRIM4-202ENST00000354241 SRSF8Q9BRL6 282 aaKnown RBP16.3■□□□□ 0.2
TRIM4-202ENST00000354241 TRIM77I1YAP6 450 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 ELLP55199 621 aaPredicted RBP16.29■□□□□ 0.2
TRIM4-202ENST00000354241 MLANAQ16655 118 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 ZNF114Q8NC26 417 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 PIFOQ8TCI5 191 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 RNASEH2CQ8TDP1 164 aaKnown RBP16.29■□□□□ 0.2
TRIM4-202ENST00000354241 SLC25A33Q9BSK2 321 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 HRH4Q9H3N8 390 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 PARP11Q9NR21 331 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 MED9Q9NWA0 146 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 C17orf112F2Z3M2 114 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 CD69Q07108 199 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 MISP3Q96FF7 219 aa16.29■□□□□ 0.2
TRIM4-202ENST00000354241 OPRK1P41145 380 aa16.28■□□□□ 0.2
TRIM4-202ENST00000354241 SERF2P84101 59 aa16.28■□□□□ 0.2
TRIM4-202ENST00000354241 NDPQ00604 133 aa16.28■□□□□ 0.2
TRIM4-202ENST00000354241 SLC16A13Q7RTY0 426 aa16.28■□□□□ 0.2
TRIM4-202ENST00000354241 CSMD1Q96PZ7 3565 aa16.28■□□□□ 0.2
TRIM4-202ENST00000354241 MDFIC2A0A1B0GVS7 189 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 FNDC10F2Z333 226 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 H3BUX3 64 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 MPDU1O75352 247 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 HLA-DRB1P01911 266 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 MFAP2P55001 183 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 BPIFB3P59826 476 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 LY6EQ16553 131 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 CENPVQ7Z7K6 275 aaPredicted RBP16.27■□□□□ 0.2
TRIM4-202ENST00000354241 OR1P1Q8NH06 330 aa16.27■□□□□ 0.2
TRIM4-202ENST00000354241 NANPQ8TBE9 248 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms