RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 HELZP42694 1942 aaKnown RBP10.78□□□□□ -0.68
COL6A3-203ENST00000353578 IL11P20809 199 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 CXorf66Q5JRM2 361 aaPredicted RBP10.78□□□□□ -0.68
COL6A3-203ENST00000353578 FGF11Q92914 225 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 LOXL4Q96JB6 756 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 FAM117AQ9C073 453 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 ATP5G1P05496 136 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 ATP5G3P48201 142 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 FOXL2P58012 376 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 ATP5G2Q06055 141 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 ZNF664Q8N3J9 261 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 IFI27L1Q96BM0 104 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 PRDM14Q9GZV8 571 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 PGPA6NDG6 321 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 SLURP2P0DP57 97 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 PLEKHB2Q96CS7 222 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 KLHDC3Q9BQ90 382 aa10.78□□□□□ -0.68
COL6A3-203ENST00000353578 MESP1Q9BRJ9 268 aa10.77□□□□□ -0.68
COL6A3-203ENST00000353578 TRAV14DV4A0A0A6YYC5 116 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 TAL2Q16559 108 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 FAM19A2Q8N3H0 131 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 COQ2Q96H96 371 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 JPT1Q9UK76 154 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 DEFB119Q8N690 84 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 LAGE3Q14657 143 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 NRN1LQ496H8 165 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 PRR14LQ5THK1 2151 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 IGHV1-24A0A0C4DH33 117 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 CCL5P13501 91 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 C2orf82Q6UX34 121 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 INSIG2Q9Y5U4 225 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.69
COL6A3-203ENST00000353578 FBXW9Q5XUX1 488 aa10.77□□□□□ -0.69
COL6A3-203ENST00000353578 BCL6BQ8N143 479 aaPredicted RBP10.77□□□□□ -0.69
COL6A3-203ENST00000353578 FAM166AQ6J272 317 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 CLEC2AQ6UVW9 174 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 TMEM86BQ8N661 226 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 RPL27AP46776 148 aaKnown RBP10.76□□□□□ -0.69
COL6A3-203ENST00000353578 C16orf92Q96LL3 132 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 SARGQ9BW04 601 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 OTORQ9NRC9 128 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 NCOA6Q14686 2063 aaPredicted RBP10.76□□□□□ -0.69
COL6A3-203ENST00000353578 EAF1Q96JC9 268 aaPredicted RBP10.76□□□□□ -0.69
COL6A3-203ENST00000353578 SPXQ9BT56 116 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 H3BMM0 161 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 LYL1P12980 280 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 HMGA1P17096 107 aaKnown RBP10.76□□□□□ -0.69
COL6A3-203ENST00000353578 UBE2WQ96B02 151 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 TFPI2P48307 235 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 SIP14410 1827 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 ELSPBP1Q96BH3 223 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 RTN4RL2Q86UN3 420 aa10.76□□□□□ -0.69
COL6A3-203ENST00000353578 IGHV3-9P01782 118 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 MFAP4P55083 255 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 ZXDCQ2QGD7 858 aaPredicted RBP10.75□□□□□ -0.69
COL6A3-203ENST00000353578 TPRX1Q8N7U7 411 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 RFESDQ8TAC1 157 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 PSG3Q16557 428 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 RNF115Q9Y4L5 304 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 SBF1O95248 1867 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 FAM231BA6NCW3 169 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 RNF7Q9UBF6 113 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 SIRT4Q9Y6E7 314 aaPredicted RBP10.75□□□□□ -0.69
COL6A3-203ENST00000353578 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 OSR1Q8TAX0 266 aaPredicted RBP10.75□□□□□ -0.69
COL6A3-203ENST00000353578 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 HILPDAQ9Y5L2 63 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 ADAMTS7Q9UKP4 1686 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 KLHDC9Q8NEP7 349 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 GPBAR1Q8TDU6 330 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 SLC25A39Q9BZJ4 359 aaPredicted RBP10.75□□□□□ -0.69
COL6A3-203ENST00000353578 DYNLRB2Q8TF09 96 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 ADAMTSL1Q8N6G6 1762 aa10.75□□□□□ -0.69
COL6A3-203ENST00000353578 C18orf12Q96KH6 178 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 TDGF1P13385 188 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 SEPSECSQ9HD40 501 aaKnown RBP10.74□□□□□ -0.69
COL6A3-203ENST00000353578 IGHV2-5P01817 119 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 CRPP02741 224 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 KRTCAP3Q53RY4 240 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 LY6G6FQ5SQ64 297 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 MPV17L2Q567V2 206 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 SPATA46Q5T0L3 261 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 ABHD17AQ96GS6 310 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 MMP17Q9ULZ9 603 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 MOSP00540 346 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 ACRP10323 421 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 ID4P47928 161 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 FAM90A1Q86YD7 464 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 SNRPD3P62318 126 aaKnown RBP10.74□□□□□ -0.69
COL6A3-203ENST00000353578 DUSP2Q05923 314 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 ANAPC1Q9H1A4 1944 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 CEACAM5P06731 702 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 GUSBP1Q15486 140 aa10.74□□□□□ -0.69
COL6A3-203ENST00000353578 MESP2Q0VG99 397 aa10.73□□□□□ -0.69
COL6A3-203ENST00000353578 MUC21A0A0G2JKD1 596 aa10.73□□□□□ -0.69
COL6A3-203ENST00000353578 MUC21A0A140T8X8 626 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms