RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DUTP33316 252 aaKnown RBP11.36□□□□□ -0.59
SMC6-201ENST00000351948 FOXL2NBQ6ZUU3 175 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 KIR3DL3Q8N743 410 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 ZNRD1Q9P1U0 126 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 NBR2O15453 112 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 PNRC1Q12796 327 aaPredicted RBP11.36□□□□□ -0.59
SMC6-201ENST00000351948 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
SMC6-201ENST00000351948 NPPCP23582 126 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 IER3P46695 156 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 LINC00305Q7Z4B0 112 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 SEC11CQ9BY50 192 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 IFI27L2Q9H2X8 130 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 LDLRAD4O15165 306 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 CD8AP01732 235 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 SP5Q6BEB4 398 aaPredicted RBP11.36□□□□□ -0.59
SMC6-201ENST00000351948 C20orf204Q6ZNR8 217 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 TEX29Q8N6K0 151 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 SRSF12Q8WXF0 261 aaKnown RBP11.36□□□□□ -0.59
SMC6-201ENST00000351948 SLC25A33Q9BSK2 321 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 TMEM56-RWDD3S4R434 201 aa11.36□□□□□ -0.59
SMC6-201ENST00000351948 RAB5AP20339 215 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
SMC6-201ENST00000351948 PQLC2Q6ZP29 291 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 NUP37Q8NFH4 326 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 OR10W1Q8NGF6 305 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 COQ2Q96H96 371 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 OR51M1Q9H341 326 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 IGHV2-26A0A0B4J1V2 119 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 ERVH48-1M5A8F1 160 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 OR9G9P0C7N8 305 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 EBLN2Q6P2I7 272 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 TMEM18Q96B42 140 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 TLN1Q9Y490 2541 aaKnown RBP11.35□□□□□ -0.59
SMC6-201ENST00000351948 PF4P02776 101 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
SMC6-201ENST00000351948 IFITM2Q01629 132 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 FAM166AQ6J272 317 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 PLXNB3Q9ULL4 1909 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 A0A1W2PS18 150 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 WISP2O76076 250 aa11.35□□□□□ -0.59
SMC6-201ENST00000351948 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 PRR14LQ5THK1 2151 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 OR2T8A6NH00 312 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 IGHV1-8P0DP01 117 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 SGMS2Q8NHU3 365 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 GAFA1Q96PS6 74 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 NPCDR1Q9BY65 106 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 C21orf62Q9NYP8 219 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 LINC00862A6NCI5 91 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 LHFPL4Q7Z7J7 247 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 TRAV14DV4A0A0A6YYC5 116 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 RNF224P0DH78 156 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 Q6ZR03 302 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 CEACAM8P31997 349 aaPredicted RBP11.34□□□□□ -0.59
SMC6-201ENST00000351948 SPANXN1Q5VSR9 72 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 DUX4L9Q6RFH8 374 aaPredicted RBP11.34□□□□□ -0.59
SMC6-201ENST00000351948 FUT9Q9Y231 359 aa11.34□□□□□ -0.59
SMC6-201ENST00000351948 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.6
SMC6-201ENST00000351948 LY6G6FQ5SQ64 297 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 UPK2O00526 184 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 TGOLN2O43493 480 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 MFAP2P55001 183 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 MYOD1P15172 320 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 Q6P435 159 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 HEPN1Q6WQI6 88 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
SMC6-201ENST00000351948 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 RNF222A6NCQ9 220 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 H0YIZ8 118 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 ZNF253O75346 499 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 NAPSAO96009 420 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 DPPA3Q6W0C5 159 aa11.33□□□□□ -0.6
SMC6-201ENST00000351948 TRAV34A0A0B4J273 112 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 PHOX2AO14813 284 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 COMPP49747 757 aaPredicted RBP11.32□□□□□ -0.6
SMC6-201ENST00000351948 RSPO1Q2MKA7 263 aaPredicted RBP11.32□□□□□ -0.6
SMC6-201ENST00000351948 OR10D4PQ8NGN7 298 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 QRFPP83859 136 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 FAM53AQ6NSI3 398 aaPredicted RBP11.32□□□□□ -0.6
SMC6-201ENST00000351948 DANCRP0C864 163 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 C18orf12Q96KH6 178 aa11.32□□□□□ -0.6
SMC6-201ENST00000351948 TRAF4Q9BUZ4 470 aaPredicted RBP11.32□□□□□ -0.6
SMC6-201ENST00000351948 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 RPL7P18124 248 aaKnown RBP11.31□□□□□ -0.6
SMC6-201ENST00000351948 DEFA6Q01524 100 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
SMC6-201ENST00000351948 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 CGAP01215 116 aa11.31□□□□□ -0.6
SMC6-201ENST00000351948 PMS2P11Q13670 270 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms