RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CGAP01215 116 aa12.32□□□□□ -0.44
TRAF3-202ENST00000351691 CRYBB3P26998 211 aa12.32□□□□□ -0.44
TRAF3-202ENST00000351691 SPATA31B1PQ5VZV4 182 aa12.32□□□□□ -0.44
TRAF3-202ENST00000351691 SLC25A34Q6PIV7 304 aa12.32□□□□□ -0.44
TRAF3-202ENST00000351691 TEPPQ6URK8 271 aa12.32□□□□□ -0.44
TRAF3-202ENST00000351691 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
TRAF3-202ENST00000351691 TRGV8A0A0C4DH27 118 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 GFRA3O60609 400 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PRR20EP86478 221 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PRR20CP86479 221 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PRR20DP86480 221 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PRR20BP86481 221 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PRR20AP86496 221 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PLGLB1Q02325 96 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 FXYD3Q14802 87 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 TMEM251Q8N6I4 163 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 FAM216AQ8WUB2 273 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 OR2V2Q96R30 315 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-202ENST00000351691 KLF13Q9Y2Y9 288 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-202ENST00000351691 WASHC3Q9Y3C0 194 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 OR4C46A6NHA9 309 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 TNFSF15O95150 251 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 NUDT3O95989 172 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 CELA3AP09093 270 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 CCL2P13500 99 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 DUTP33316 252 aaKnown RBP12.31□□□□□ -0.44
TRAF3-202ENST00000351691 MAGEA5P43359 124 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 TCL1AP56279 114 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 OR52L2PQ8NGH6 319 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 GP6Q9HCN6 339 aa12.31□□□□□ -0.44
TRAF3-202ENST00000351691 PEF1Q9UBV8 284 aaKnown RBP12.31□□□□□ -0.44
TRAF3-202ENST00000351691 GAGE12BA1L429 117 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 OR2T8A6NH00 312 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 LINC00473A8K010 186 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 HBZP02008 142 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 SLC35B1P78383 322 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 OR4A16Q8NH70 328 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
TRAF3-202ENST00000351691 CHRDL1Q9BU40 450 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 A0A1W2PRE2 83 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 J3QW42 95 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 APOBEC3AP31941 199 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-202ENST00000351691 SSTR5P35346 364 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 SLC25A40Q8TBP6 338 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 GRAMD2BQ96HH9 432 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
TRAF3-202ENST00000351691 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 CORTO00230 105 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 FOXG1P55316 489 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-202ENST00000351691 PSG9Q00887 426 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 RNFT1Q5M7Z0 435 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 ZNF503-AS2A6NEH8 195 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 SP1P08047 785 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 IGLC1P0CG04 106 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 HIST1H1AQ02539 215 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-202ENST00000351691 PSG5Q15238 335 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 FAM120AOSQ5T036 256 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 PRAMEF5Q5TYX0 476 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 PRAMEF6Q5VXH4 476 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 SVIPQ8NHG7 77 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
TRAF3-202ENST00000351691 TRIB1Q96RU8 372 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 PMCHL2Q9BQD1 86 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
TRAF3-202ENST00000351691 MUC21A0A0G2JKD1 596 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 MUC21A0A140T8X8 626 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 HAND1O96004 215 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 CA7P43166 264 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 MEOX1P50221 254 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 RNASEKQ6P5S7 137 aaKnown RBP12.28□□□□□ -0.44
TRAF3-202ENST00000351691 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 FAM214BQ7L5A3 538 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 MDS2Q8NDY4 140 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 FER1L6-AS2Q96M78 137 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 TMEM191AQ9H0A3 160 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 SERTAD4Q9NUC0 356 aa12.28□□□□□ -0.44
TRAF3-202ENST00000351691 NDUFS8O00217 210 aa12.27□□□□□ -0.44
TRAF3-202ENST00000351691 PTPRBP23467 1997 aa12.27□□□□□ -0.44
TRAF3-202ENST00000351691 ESPL1Q14674 2120 aa12.27□□□□□ -0.45
TRAF3-202ENST00000351691 SYS1-DBNDD2H3BUS1 97 aa12.27□□□□□ -0.45
TRAF3-202ENST00000351691 TAS2R45P59539 299 aa12.27□□□□□ -0.45
TRAF3-202ENST00000351691 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.45
TRAF3-202ENST00000351691 WDR86Q86TI4 376 aa12.27□□□□□ -0.45
TRAF3-202ENST00000351691 SMPD2O60906 423 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 CELA3BP08861 270 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 OR5AL1P0C617 328 aa12.26□□□□□ -0.45
TRAF3-202ENST00000351691 MGST1P10620 155 aaKnown RBP12.26□□□□□ -0.45
TRAF3-202ENST00000351691 ERVK-16P61578 105 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms