RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPRO-202ENST00000348962 H2BFSP57053 126 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 MEIG1Q5JSS6 88 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 LDLRAD2Q5SZI1 272 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 TRAF4Q9BUZ4 470 aaPredicted RBP12.91□□□□□ -0.34
PTPRO-202ENST00000348962 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 TIMM23O14925 209 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 HLA-DRB1P01911 266 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 NMBP08949 121 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 DANCRP0C864 163 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 CCL1P22362 96 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 RHOGP84095 191 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 M0R381 172 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 ZNF600Q6ZNG1 722 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
PTPRO-202ENST00000348962 ATRXP46100 2492 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 MTCL1Q9Y4B5 1905 aaKnown RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 BMPERQ8N8U9 685 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 MBD3L4A6NDZ8 208 aaPredicted RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 MBD3L3A6NE82 208 aaPredicted RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 FBLL1A6NHQ2 334 aaKnown RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 MBD3L5A6NJ08 208 aaPredicted RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 SRRM5B3KS81 715 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 OR9G9P0C7N8 305 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 IGFBP3P17936 291 aaPredicted RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 LAIR2Q6ISS4 152 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 MBD3L2Q8NHZ7 208 aaPredicted RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 PAX1P15863 534 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
PTPRO-202ENST00000348962 CD24P25063 80 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 EMP1P54849 157 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 CYB5R2Q6BCY4 276 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 PARLQ9H300 379 aa12.9□□□□□ -0.34
PTPRO-202ENST00000348962 A0A0G2JNJ9 132 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 EIF3GO75821 320 aaKnown RBP eCLIP12.9□□□□□ -0.35
PTPRO-202ENST00000348962 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 ZNF497Q6ZNH5 498 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 TMEM167AQ8TBQ9 72 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 FBLN5Q9UBX5 448 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 Q9UFV3 132 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 SLC25A15Q9Y619 301 aa12.9□□□□□ -0.35
PTPRO-202ENST00000348962 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
PTPRO-202ENST00000348962 K7ENP7 123 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 UQCRFS1P47985 274 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
PTPRO-202ENST00000348962 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 OR10AG1Q8NH19 301 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 CADP27708 2225 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 Q0VFX4 171 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 PSMB11A5LHX3 300 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 OOSP1A8MZH6 123 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 SLC25A16P16260 332 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 MDKP21741 143 aaPredicted RBP12.89□□□□□ -0.35
PTPRO-202ENST00000348962 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
PTPRO-202ENST00000348962 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 FOXG1P55316 489 aaPredicted RBP12.88□□□□□ -0.35
PTPRO-202ENST00000348962 CRYGSP22914 178 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
PTPRO-202ENST00000348962 MRPL18Q9H0U6 180 aaKnown RBP12.88□□□□□ -0.35
PTPRO-202ENST00000348962 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 TUBGCP6Q96RT7 1819 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 EFNA2O43921 213 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 NSUN5P1Q3KNT7 163 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 PTPRFP10586 1907 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 IGHG3P01860 377 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 FGFBP3Q8TAT2 258 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 SDF2L1Q9HCN8 221 aa12.88□□□□□ -0.35
PTPRO-202ENST00000348962 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
PTPRO-202ENST00000348962 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
PTPRO-202ENST00000348962 ZNF236Q9UL36 1845 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 CMC4P56277 68 aaPredicted RBP12.87□□□□□ -0.35
PTPRO-202ENST00000348962 ZNF383Q8NA42 475 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
PTPRO-202ENST00000348962 IGKV1-9A0A0C4DH69 117 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 SMIM12Q96EX1 92 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 MINOS1Q5TGZ0 78 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 LYZL4Q96KX0 146 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 HSPB9Q9BQS6 159 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 MINOS1-NBL1R4GNA1 71 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 C15orf61A6NNL5 157 aa12.87□□□□□ -0.35
PTPRO-202ENST00000348962 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
PTPRO-202ENST00000348962 CIARTQ8N365 385 aaPredicted RBP12.87□□□□□ -0.35
PTPRO-202ENST00000348962 SIPA1L1O43166 1804 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 CD8AP01732 235 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 HBBP68871 147 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 LTBP1Q14766 1721 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 LYPD3O95274 346 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 CGAP01215 116 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 HEPN1Q6WQI6 88 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms