RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 HABP2Q14520 560 aaPredicted RBP16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 BEND2Q8NDZ0 799 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 NEU4Q8WWR8 484 aaPredicted RBP16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 MALSU1Q96EH3 234 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 TIMD4Q96H15 378 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 ZNF430Q9H8G1 570 aaPredicted RBP16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 E7EUB6 86 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 CYP2G1PQ6ZSU1 146 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 ZFP82Q8N141 532 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 NAT8Q9UHE5 227 aa16.45■□□□□ 0.22
CHRNA3-202ENST00000348639 BUB1B-PAK6H3BSN5 160 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 AGAP20933 346 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 C4orf17Q53FE4 359 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 LY6G5BQ8NDX9 201 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 ABHD5Q8WTS1 349 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 TMEM242Q9NWH2 141 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 ACACBO00763 2458 aa16.44■□□□□ 0.22
CHRNA3-202ENST00000348639 TACC2O95359 2948 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 TMEM8BA6NDV4 472 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 CGB1A6NKQ9 187 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 SLC25A17O43808 307 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 CXorf1O96002 111 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 GAMTQ14353 236 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 ITLN2Q8WWU7 325 aaPredicted RBP16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 RITA1Q96K30 269 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 SAV1Q9H4B6 383 aaPredicted RBP16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 BIN3Q9NQY0 253 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 SLC45A2Q9UMX9 530 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 C11orf94C9JXX5 98 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 ENSAO43768 121 aaKnown RBP16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 ARL14EPLP0DKL9 152 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 RHOBP62745 196 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 CD69Q07108 199 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 TMEM241Q24JQ0 296 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 SPNS3Q6ZMD2 512 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 MOB3BQ86TA1 216 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 DTX2Q86UW9 622 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 C2CD4CQ8TF44 421 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 CACNG8Q8WXS5 425 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 RPUSD4Q96CM3 377 aaKnown RBP16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 PARLQ9H300 379 aa16.43■□□□□ 0.22
CHRNA3-202ENST00000348639 IGHV3-72A0A0B4J1Y9 119 aa16.42■□□□□ 0.22
CHRNA3-202ENST00000348639 LIPFP07098 398 aa16.42■□□□□ 0.22
CHRNA3-202ENST00000348639 LINC00869P0C866 280 aa16.42■□□□□ 0.22
CHRNA3-202ENST00000348639 ELOBQ15370 118 aa16.42■□□□□ 0.22
CHRNA3-202ENST00000348639 ZNF674Q2M3X9 581 aa16.42■□□□□ 0.22
CHRNA3-202ENST00000348639 TEX45Q8NA69 505 aa16.42■□□□□ 0.22
CHRNA3-202ENST00000348639 IGKV1OR2-108A0A075B7D4 117 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 A0A1W2PPR1 153 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 GPX4P36969 197 aaPredicted RBP16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 WT1-ASQ06250 92 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 MRGPRG-AS1Q2M3A8 158 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 C10orf55Q5SWW7 151 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 SEPSECSQ9HD40 501 aaKnown RBP16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 AMMECR1Q9Y4X0 333 aaPredicted RBP16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 INSIG2Q9Y5U4 225 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 IGHV1-3A0A0C4DH29 117 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 PDE6DO43924 150 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 MLANAQ16655 118 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 OR4P4Q8NGL7 312 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 NANPQ8TBE9 248 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 TPSG1Q9NRR2 321 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 PRELID1Q9Y255 219 aa16.41■□□□□ 0.22
CHRNA3-202ENST00000348639 C22orf46C9J442 243 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 COX7A1P24310 79 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 ZNF343Q6P1L6 599 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 Q8WTZ3 238 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 TXNDC17Q9BRA2 123 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 ONECUT1Q9UBC0 465 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 CLDN34H7C241 214 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 TSPAN9O75954 239 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 SUB1P53999 127 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 UBE2G2P60604 165 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 RNASEH2CQ8TDP1 164 aaKnown RBP16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 SLC35E1Q96K37 410 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 CTDSP1Q9GZU7 261 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 CHODLQ9H9P2 273 aa16.4■□□□□ 0.22
CHRNA3-202ENST00000348639 CDKN1AP38936 164 aa16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 CST9LP1Q5W188 147 aa16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 SLC16A13Q7RTY0 426 aa16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 C1QL4Q86Z23 238 aa16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 UBTD1Q9HAC8 227 aa16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 KLF2Q9Y5W3 355 aaPredicted RBP16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 URGCP-MRPS24S4R325 110 aa16.39■□□□□ 0.21
CHRNA3-202ENST00000348639 LY6LH3BQJ8 138 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 CRYGBP07316 175 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 NPPCP23582 126 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 OR10J1P30954 320 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 ATP5G3P48201 142 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 RND2P52198 227 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 ADIRFQ15847 76 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 SPATA31B1PQ5VZV4 182 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 MMD2Q8IY49 270 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 RPEQ96AT9 228 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 GCHFRP30047 84 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 RPL23P62829 140 aaKnown RBP16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 PRSS8Q16651 343 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 PNKDQ8N490 385 aa16.38■□□□□ 0.21
CHRNA3-202ENST00000348639 A0A1W2PPI3 338 aa16.37■□□□□ 0.21
CHRNA3-202ENST00000348639 F6UZH7 168 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms