RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 AQP3Q92482 292 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 TAF15Q92804 592 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 LEAP2Q969E1 77 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 GPHA2Q96T91 129 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 IGHV3OR16-10A0A075B7F0 116 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 SCTP09683 121 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 ZNF703Q9H7S9 590 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 ARID1AO14497 2285 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 C3orf79P0CE67 100 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 LOXL3P58215 753 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 RSPO4Q2I0M5 234 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 PCOLCEQ15113 449 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 LINC00596Q86U02 117 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 OR1L8Q8NGR8 309 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 C5orf66Q9H5L9 145 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
SMARCE1-202ENST00000348513 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 ANOS1P23352 680 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 MORN3Q6PF18 240 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 ZNF519Q8TB69 540 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 PPDPFLQ8WWR9 84 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 RNF126Q9BV68 326 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 NRXN2Q9P2S2 1712 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 KCNMB1Q16558 191 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 TMEM56-RWDD3S4R434 201 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 HAX1O00165 279 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 HCP5Q6MZN7 132 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.9
SMARCE1-202ENST00000348513 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.91
SMARCE1-202ENST00000348513 BMPERQ8N8U9 685 aa9.4□□□□□ -0.91
SMARCE1-202ENST00000348513 FDCSPQ8NFU4 85 aa9.4□□□□□ -0.91
SMARCE1-202ENST00000348513 IL36RNQ9UBH0 155 aa9.4□□□□□ -0.91
SMARCE1-202ENST00000348513 SAP30O75446 220 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 LY6EQ16553 131 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 SLC25A47Q6Q0C1 308 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 LINC01560Q8TB33 94 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 TMEM160Q9NX00 188 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 RGPD3A6NKT7 1758 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF114Q8NC26 417 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 OR1L1Q8NH94 360 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 DOCK3Q8IZD9 2030 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 A0A1W2PR77 199 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 FNDC10F2Z333 226 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 CGB1A6NKQ9 187 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 CRIM1Q9NZV1 1036 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 LHFPL6Q9Y693 200 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 CABIN1Q9Y6J0 2220 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 hDV102S1A0JD36 115 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF585BQ52M93 769 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 SLC25A53Q5H9E4 307 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
SMARCE1-202ENST00000348513 RRHO14718 337 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 CRXO43186 299 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 PLAUP00749 431 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 FGF12P61328 243 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF56Q15929 161 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 ZFC3H1O60293 1989 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 CKS2P33552 79 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 PROB1E7EW31 1015 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 MGST3O14880 152 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 SMAD7O15105 426 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 ZNF688P0C7X2 276 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 TCF24Q7RTU0 167 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 SIGLEC12Q96PQ1 595 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 RFPL3SP0C7P2 107 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 SCN2AQ99250 2005 aa9.38□□□□□ -0.91
SMARCE1-202ENST00000348513 GLRXP35754 106 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 SBF2Q86WG5 1849 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 ARL14EPLP0DKL9 152 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 MPV17P39210 176 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 NFAM1Q8NET5 270 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 KLF14Q8TD94 323 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 ABHD17AQ96GS6 310 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 MYOFQ9NZM1 2061 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 RND2P52198 227 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 ZXDCQ2QGD7 858 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 FHL5Q5TD97 284 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 HIGD1AQ9Y241 93 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 IGHV3OR16-12A0A075B7B8 117 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 A4D1N5 150 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 J3QW42 95 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 SMIM10L1P0DMW3 83 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 ATP5J2P56134 94 aa9.37□□□□□ -0.91
SMARCE1-202ENST00000348513 FOXL1Q12952 345 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms