RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 LSM10Q969L4 123 aaKnown RBP9.33□□□□□ -0.92
SGCA-202ENST00000344627 MARC2Q969Z3 335 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 CMTM3Q96MX0 182 aa9.33□□□□□ -0.92
SGCA-202ENST00000344627 TRAV25A0A0B4J276 109 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 A8MWP6 167 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 Q56UQ5 140 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 SLC38A6Q8IZM9 456 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 RAB2BQ8WUD1 216 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 AP3S1Q92572 193 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 MISP3Q96FF7 219 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 TSC22D3Q99576 134 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
SGCA-202ENST00000344627 F11RQ9Y624 299 aaKnown RBP9.32□□□□□ -0.92
SGCA-202ENST00000344627 IGHV3OR16-8A0A075B7F1 116 aa9.31□□□□□ -0.92
SGCA-202ENST00000344627 ZNF701M0R085 212 aaPredicted RBP9.31□□□□□ -0.92
SGCA-202ENST00000344627 ZNF207O43670 478 aaKnown RBP9.31□□□□□ -0.92
SGCA-202ENST00000344627 TMBIM6P55061 237 aa9.31□□□□□ -0.92
SGCA-202ENST00000344627 GPR107Q5VW38 600 aa9.31□□□□□ -0.92
SGCA-202ENST00000344627 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
SGCA-202ENST00000344627 BSCL2Q96G97 398 aaPredicted RBP9.31□□□□□ -0.92
SGCA-202ENST00000344627 NAA50Q9GZZ1 169 aaKnown RBP9.31□□□□□ -0.92
SGCA-202ENST00000344627 GAR1Q9NY12 217 aaKnown RBP9.31□□□□□ -0.92
SGCA-202ENST00000344627 C21orf62Q9NYP8 219 aa9.31□□□□□ -0.92
SGCA-202ENST00000344627 MRPL27Q9P0M9 148 aaKnown RBP9.31□□□□□ -0.92
SGCA-202ENST00000344627 EXTL2Q9UBQ6 330 aa9.31□□□□□ -0.92
SGCA-202ENST00000344627 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 ZNF182P17025 639 aaPredicted RBP9.3□□□□□ -0.92
SGCA-202ENST00000344627 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
SGCA-202ENST00000344627 PI3P19957 117 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 MFAP2P55001 183 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 ELLP55199 621 aaPredicted RBP9.3□□□□□ -0.92
SGCA-202ENST00000344627 UCP3P55916 312 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 RNASE10Q5GAN6 216 aaKnown RBP9.3□□□□□ -0.92
SGCA-202ENST00000344627 LAMTOR1Q6IAA8 161 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 OR5B3Q8NH48 314 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 OR52I2Q8NH67 350 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 SCARB1Q8WTV0 552 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 MRGPRFQ96AM1 343 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 ZNF436Q9C0F3 470 aaPredicted RBP9.3□□□□□ -0.92
SGCA-202ENST00000344627 KLK11Q9UBX7 282 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 TP53TG1Q9Y2A0 90 aa9.3□□□□□ -0.92
SGCA-202ENST00000344627 LOC102724200A0A096LPH7 203 aaPredicted RBP9.29□□□□□ -0.92
SGCA-202ENST00000344627 YIF1AO95070 293 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 GABARAPO95166 117 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 ERHP84090 104 aaKnown RBP9.29□□□□□ -0.92
SGCA-202ENST00000344627 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 CLVS1Q8IUQ0 354 aaPredicted RBP9.29□□□□□ -0.92
SGCA-202ENST00000344627 CADM3Q8N126 398 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 OR2C3Q8N628 320 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 TMEM190Q8WZ59 177 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 PINX1Q96BK5 328 aaKnown RBP9.29□□□□□ -0.92
SGCA-202ENST00000344627 SEC22AQ96IW7 307 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 CHRDL1Q9BU40 450 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 GGTLC1Q9BX51 225 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
SGCA-202ENST00000344627 FAM212BQ9NTI7 297 aaPredicted RBP9.29□□□□□ -0.92
SGCA-202ENST00000344627 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
SGCA-202ENST00000344627 CCDC160A6NGH7 325 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 K7EIM0 57 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 NDUFA4O00483 81 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 UBE2CO00762 179 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 NUPL2O15504 423 aaKnown RBP9.28□□□□□ -0.92
SGCA-202ENST00000344627 RGS5O15539 181 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 IGKV1-39P01597 117 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 CD3DP04234 171 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 IGKV1D-39P04432 117 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 C8orf88P0DMB2 117 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 PPP5CP53041 499 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 MFAP4P55083 255 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 PIGPP57054 158 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 IZUMO4Q1ZYL8 232 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 SCGB2B2Q4G0G5 96 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 WFDC3Q8IUB2 231 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 OR1P1Q8NH06 330 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 RNASE11Q8TAA1 199 aaKnown RBP9.28□□□□□ -0.92
SGCA-202ENST00000344627 C5orf66Q9H5L9 145 aa9.28□□□□□ -0.92
SGCA-202ENST00000344627 BIRC6Q9NR09 4857 aa9.27□□□□□ -0.92
SGCA-202ENST00000344627 IFNA17P01571 189 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 AKR1C2P52895 323 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 APOC4P55056 127 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 HSPE1P61604 102 aaKnown RBP9.27□□□□□ -0.93
SGCA-202ENST00000344627 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
SGCA-202ENST00000344627 CTF1Q16619 201 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 TRIM16LQ309B1 348 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 Q6ZWC4 215 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 TMEM217Q8N7C4 229 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 COPZ2Q9P299 210 aa9.27□□□□□ -0.93
SGCA-202ENST00000344627 RSL24D1Q9UHA3 163 aaKnown RBP9.27□□□□□ -0.93
SGCA-202ENST00000344627 EPPK1P58107 5090 aaKnown RBP9.26□□□□□ -0.93
SGCA-202ENST00000344627 IGHV3-49A0A0A0MS15 119 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 ATG12O94817 140 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 RAB3DO95716 219 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 MT-CO2P00403 227 aa9.26□□□□□ -0.93
SGCA-202ENST00000344627 BMI1P35226 326 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms