RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
TRIOBP-202ENST00000344404 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
TRIOBP-202ENST00000344404 HMSDA8MTL9 139 aa10.37□□□□□ -0.75
TRIOBP-202ENST00000344404 LILRA1O75019 489 aa10.37□□□□□ -0.75
TRIOBP-202ENST00000344404 CLPPQ16740 277 aaPredicted RBP10.37□□□□□ -0.75
TRIOBP-202ENST00000344404 PHF3Q92576 2039 aaKnown RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 CA11O75493 328 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 EFEMP2O95967 443 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 SURF2Q15527 256 aaPredicted RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 IL17RELQ6ZVW7 336 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 VCX2Q9H322 139 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 MPDZO75970 2070 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 H1FOOQ8IZA3 346 aaPredicted RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 SELENOHQ8IZQ5 122 aaKnown RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 RPRMQ9NS64 109 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 IGKV1-8A0A0C4DH67 115 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 LINC00614P0C842 121 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 CRIM1Q9NZV1 1036 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 MSGN1A6NI15 193 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 HBDP02042 147 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 APCDD1LQ8NCL9 501 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 TAF15Q92804 592 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 TMEM186Q96B77 213 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 NABP2Q9BQ15 211 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 TRAF4Q9BUZ4 470 aaPredicted RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 CXorf65A6NEN9 183 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 RAMP1O60894 148 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 JPT2Q9H910 190 aa10.36□□□□□ -0.75
TRIOBP-202ENST00000344404 HSPE1P61604 102 aaKnown RBP10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 PRSS22Q9GZN4 317 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 COL5A3P25940 1745 aaPredicted RBP10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 TNS1Q9HBL0 1735 aaKnown RBP10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 IGKV1D-42A0A075B6H8 117 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 GATA2P23769 480 aaPredicted RBP10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 LEPP41159 167 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 ZNF818PQ6ZRF7 136 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 A0A087WX48 190 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 DMRTA1Q5VZB9 504 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 LAMTOR3Q9UHA4 124 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 COL4A5P29400 1685 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 SBF2Q86WG5 1849 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 CECR9P0C854 216 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 C9orf106Q8NAJ2 232 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 GPR132Q9UNW8 380 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 CD28P10747 220 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 CCL3L1P16619 93 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 CYB5R2Q6BCY4 276 aa10.35□□□□□ -0.75
TRIOBP-202ENST00000344404 P2RY4P51582 365 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 PILRAQ9UKJ1 303 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 SCAND1P57086 179 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 C1QTNF12Q5T7M4 302 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 DPM3Q9P2X0 92 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 C1QTNF9P0C862 333 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 FHITP49789 147 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 BRD3OSQ6XYD6 125 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 LHFPL6Q9Y693 200 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 SIRT4Q9Y6E7 314 aaPredicted RBP10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 CHD3Q12873 2000 aaKnown RBP10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 TICRRQ7Z2Z1 1910 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 SPTA1P02549 2419 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 SP5Q6BEB4 398 aaPredicted RBP10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 CD300LDQ6UXZ3 194 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 ZNF79Q15937 498 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 Q5PR19 223 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 TCF19Q9Y242 345 aa10.34□□□□□ -0.75
TRIOBP-202ENST00000344404 TMEM50AO95807 157 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 PRB1P04280 392 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 NEU4Q8WWR8 484 aaPredicted RBP10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 PRR31Q5SQ13 230 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 KIF26BQ2KJY2 2108 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 F8WEM9 126 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 RNASE6Q93091 150 aaKnown RBP10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 SLC25A2Q9BXI2 301 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 MIXL1Q9H2W2 232 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 KLF4O43474 513 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 ZNF729A6NN14 1252 aaPredicted RBP10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 ZNF146Q15072 292 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 AGAP20933 346 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 GATA4P43694 442 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 KLRD1Q13241 179 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 MARVELD1Q9BSK0 173 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 C21orf62Q9NYP8 219 aa10.33□□□□□ -0.76
TRIOBP-202ENST00000344404 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
TRIOBP-202ENST00000344404 LY6HO94772 140 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms