RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PRCDQ00LT1 54 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 PAX8Q06710 450 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 TPTE2P1Q5T6R2 138 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 OR8G2PQ6IF36 304 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 VMO1Q7Z5L0 202 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 SCGB1C1Q8TD33 95 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 CITED1Q99966 193 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 PSMG3Q9BT73 122 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 SH3BGRL3Q9H299 93 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 PLEKHA3Q9HB20 300 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 DPM3Q9P2X0 92 aa10.78□□□□□ -0.68
HERPUD1-202ENST00000344114 IFNA10P01566 189 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 IGLV2-23P01705 113 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 IGHV4-38-2P0DP08 117 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 RAB11AP62491 216 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 RPL8P62917 257 aaKnown RBP10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 LRRC75BQ2VPJ9 315 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 PXDC1Q5TGL8 231 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 HCP5Q6MZN7 132 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 IL34Q6ZMJ4 242 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 Q6ZRG5 221 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 MOB3BQ86TA1 216 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 OR2G3Q8NGZ4 309 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 RNF5Q99942 180 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 WNK1Q9H4A3 2382 aa10.77□□□□□ -0.68
HERPUD1-202ENST00000344114 UBE2L5PA0A1B0GUS4 154 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 A0A1W2PPI3 338 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 I3L521 148 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 CAMLGP49069 296 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 F2RL1P55085 397 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 ATP5IP56385 69 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 KLRD1Q13241 179 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 MINOS1Q5TGZ0 78 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 DPPA3Q6W0C5 159 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 TEX45Q8NA69 505 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 OR1L8Q8NGR8 309 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 GGACTQ9BVM4 153 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 WDR61Q9GZS3 305 aaKnown RBP10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 PRDM13Q9H4Q3 707 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 UQCC1Q9NVA1 299 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 PLA2G2EQ9NZK7 142 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 TIMM9Q9Y5J7 89 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 MINOS1-NBL1R4GNA1 71 aa10.77□□□□□ -0.69
HERPUD1-202ENST00000344114 TEX50A0A1B0GTY4 177 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 A0A1W2PN81 502 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 INS-IGF2F8WCM5 200 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 NPY1RP25929 384 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 CHRNA7P36544 502 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 DLK1P80370 383 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 RUNX1Q01196 453 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 PRB3Q04118 309 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 HABP2Q14520 560 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 TOR2AQ5JU69 321 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 CCDC144NLQ6NUI1 221 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 UQCC3Q6UW78 93 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 THNSL2Q86YJ6 484 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 SLC24A4Q8NFF2 622 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 MARC2Q969Z3 335 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 COMMD5Q9GZQ3 224 aa10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-202ENST00000344114 IGHV3-72A0A0B4J1Y9 119 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 MDFIC2A0A1B0GVS7 189 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 M0QZ24 198 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 TIMM23O14925 209 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 HOXA3O43365 443 aaPredicted RBP10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 SLC25A17O43808 307 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 TOX4O94842 621 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 PRH1P02810 166 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 CD1BP29016 333 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 MAS1LP35410 378 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 SERF2P84101 59 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 AKR1C8PQ5T2L2 129 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 BTNL8Q6UX41 500 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 ETV3LQ6ZN32 361 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 MRPL41Q8IXM3 137 aaKnown RBP10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 MMD2Q8IY49 270 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 COMMD1Q8N668 190 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 OR4F5Q8NH21 305 aa10.75□□□□□ -0.69
HERPUD1-202ENST00000344114 IGHV3OR16-10A0A075B7F0 116 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 RNASEK-C17orf49H0YIS7 233 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 NDUFA7O95182 113 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 KRTAP10-3P60369 221 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 PJVKQ0ZLH3 352 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 HINT2Q9BX68 163 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 ZNF430Q9H8G1 570 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 NDUFA4L2Q9NRX3 87 aa10.74□□□□□ -0.69
HERPUD1-202ENST00000344114 CLPSL1A2RUU4 121 aa10.73□□□□□ -0.69
HERPUD1-202ENST00000344114 KRBOX1C9JBD0 128 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms