RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ABHD12Q8N2K0 398 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 GPR75O95800 540 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 SIRT4Q9Y6E7 314 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 XRN1Q8IZH2 1706 aaKnown RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 NALCNQ8IZF0 1738 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 OSR2Q8N2R0 312 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 SCAMP4Q969E2 229 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM243Q9BU79 118 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 BVES-AS1Q5T3Y7 98 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF740Q8NDX6 193 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 RIF1Q5UIP0 2472 aaKnown RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 C15orf65H3BRN8 121 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 EREGO14944 169 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 RGPD1P0DJD0 1748 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TAF10Q12962 218 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 MST1LQ2TV78 715 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 UNQ6494/PRO21346Q6UXR6 183 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 AAED1Q7RTV5 226 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 LHFPL1Q86WI0 220 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF441Q8N8Z8 693 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 WBP2Q969T9 261 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TEX37Q96LM6 180 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SLC25A53Q5H9E4 307 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 UBE2WQ96B02 151 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 C4orf45Q96LM5 186 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 KLF5Q13887 457 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 GUSBP1Q15486 140 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 MED19A0JLT2 244 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 CX3CL1P78423 397 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 WFDC6Q9BQY6 131 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SLC25A10Q9UBX3 287 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 CCDC88AQ3V6T2 1871 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TRAV21A0A0B4J279 112 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TISP43B9A030 160 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 PPYP01298 95 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 EGR4Q05215 589 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SELENOKQ9Y6D0 94 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SONP18583 2426 aaKnown RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 RHODO00212 210 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SEC61GP60059 68 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 STPG4Q8N801 248 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 MORN4Q8NDC4 146 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 A0A1W2PPE3 182 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 A0A1W2PQH9 124 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SYS1-DBNDD2H3BUS1 97 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 PEBP1P30086 187 aaKnown RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 HIST1H4AP62805 103 aaKnown RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 C10orf113Q5VZT2 155 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 C17orf99Q6UX52 265 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 F11RQ9Y624 299 aaKnown RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TXNDC8Q6A555 127 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 FAM166AQ6J272 317 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TRAV13-2A0A0B4J235 113 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 VWC2LB2RUY7 222 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 F2RL2O00254 374 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 CLECL1Q8IZS7 167 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 PDFQ9HBH1 243 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF841Q6ZN19 808 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 UBE2BP63146 152 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 C20orf141Q9NUB4 165 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 M0R381 172 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 DLL1O00548 723 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 HOXB2P14652 356 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 ZFP36L2P47974 494 aaKnown RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 BHLHA9Q7RTU4 235 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 RNF114Q9Y508 228 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TECTAO75443 2155 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 LOXL3P58215 753 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TEN1Q86WV5 123 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SP8Q8IXZ3 490 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 LILRA3Q8N6C8 439 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 ADAD2Q8NCV1 583 aaKnown RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SMIM35A0A1B0GVV1 85 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 A0A1W2PRE2 83 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 FOXI3A8MTJ6 420 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SPINT3P49223 89 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 TXNRD3NBQ6F5E7 133 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 IGHV4-34P06331 123 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 FBXO45P0C2W1 286 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 SCNM1Q9BWG6 230 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 NDUFA7O95182 113 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 IGFBP2P18065 325 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 HERV-K104P63124 156 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF77Q15935 545 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 C1orf195Q5TG92 126 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 VWCEQ96DN2 955 aa3.19□□□□□ -1.9
SYNE2-202ENST00000344113 DAD1P61803 113 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 BCORP1Q8N888 145 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 RBM24Q9BX46 236 aaKnown RBP3.18□□□□□ -1.9
SYNE2-202ENST00000344113 AGRNO00468 2067 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF56Q15929 161 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 SLC48A1Q6P1K1 146 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 GATD1Q8NB37 220 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 C16orf92Q96LL3 132 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 ELNP15502 786 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 C1orf140Q5VVS0 124 aa3.18□□□□□ -1.9
SYNE2-202ENST00000344113 TSACCQ96A04 125 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms