RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 OR4A5Q8NH83 315 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 VSIRQ9H7M9 311 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 IL36BQ9NZH7 164 aa6.78□□□□□ -1.32
UBE4B-202ENST00000343090 PPIAL4CA0A0B4J2A2 164 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 KLF7O75840 302 aaPredicted RBP6.77□□□□□ -1.33
UBE4B-202ENST00000343090 LINC00271P0C7V0 271 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 PPIAL4GP0DN37 164 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 DERL1Q9BUN8 251 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF581Q9P0T4 197 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 LINC01560Q8TB33 94 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 TXNDC17Q9BRA2 123 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM56-RWDD3S4R434 201 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 IGKV1-27A0A075B6S5 117 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV2OR16-5A0A0B4J2B6 119 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 SNAI2O43623 268 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF146Q15072 292 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 TPTE2P1Q5T6R2 138 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 SCGB1D4Q6XE38 83 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 OR51G1Q8NGK1 321 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 TCF20Q9UGU0 1960 aaKnown RBP6.77□□□□□ -1.33
UBE4B-202ENST00000343090 LOC102723996A0A087X1L8 192 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 TRAV24A0A0B4J272 114 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 C9orf172C9J069 976 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 PNKDQ8N490 385 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 C9orf106Q8NAJ2 232 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 OR4C13Q8NGP0 309 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 GATAD1Q8WUU5 269 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 SRSF12Q8WXF0 261 aaKnown RBP6.77□□□□□ -1.33
UBE4B-202ENST00000343090 FAM131CQ96AQ9 280 aa6.77□□□□□ -1.33
UBE4B-202ENST00000343090 MPDZO75970 2070 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 FAM166AQ6J272 317 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 CCDC144NLQ6NUI1 221 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM105Q8N8V8 129 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 TMEM70Q9BUB7 260 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 FNDC4Q9H6D8 234 aaPredicted RBP6.76□□□□□ -1.33
UBE4B-202ENST00000343090 EP300Q09472 2414 aaPredicted RBP6.76□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 IGLV3-32A0A0A0MS00 114 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3-74A0A0B4J1X5 117 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3-23P01764 117 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 PSG1P11464 419 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 LOXL3P58215 753 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 GOLT1AQ6ZVE7 132 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 OR9G1Q8NH87 305 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 CNOT1A5YKK6 2376 aaKnown RBP6.76□□□□□ -1.33
UBE4B-202ENST00000343090 ZNF324BQ6AW86 544 aaPredicted RBP6.76□□□□□ -1.33
UBE4B-202ENST00000343090 LINC00305Q7Z4B0 112 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 LHFPL1Q86WI0 220 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 NCOR1P1Q9H4R4 102 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 NCOR1O75376 2440 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 PLXNA3P51805 1871 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3OR16-10A0A075B7F0 116 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV1-69-2A0A0G2JMI3 117 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 PGPEP1LA6NFU8 196 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 FOXA3P55318 350 aaPredicted RBP6.76□□□□□ -1.33
UBE4B-202ENST00000343090 ZCCHC24Q8N2G6 241 aaKnown RBP6.76□□□□□ -1.33
UBE4B-202ENST00000343090 OR4D5Q8NGN0 318 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 NABP1Q96AH0 204 aa6.76□□□□□ -1.33
UBE4B-202ENST00000343090 A0A1B0GUS0 222 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-202ENST00000343090 MAS1LP35410 378 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 KIR2DL2P43627 348 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-202ENST00000343090 SMAGPQ0VAQ4 97 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 FHL1Q13642 323 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 SPSB3Q6PJ21 355 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 HLA-DRB1P01911 266 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 CRYGSP22914 178 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 CKS2P33552 79 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 GLRXP35754 106 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
UBE4B-202ENST00000343090 MIR17HGQ75NE6 70 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 SFXN3Q9BWM7 321 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 COX11Q9Y6N1 276 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 SRCAPQ6ZRS2 3230 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 TRAV30A0A087WSZ9 112 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 TRAV9-2A0A087WT02 112 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 IFNL4K9M1U5 179 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 TDGF1P13385 188 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 GFRA1P56159 465 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 FAM90A2PQ658T7 463 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 TEX29Q8N6K0 151 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 MYOZ3Q8TDC0 251 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 PRB4P10163 310 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-202ENST00000343090 GCSHP23434 173 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 NRN1LQ496H8 165 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 SELENOKQ9Y6D0 94 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 THSD7BQ9C0I4 1608 aa6.75□□□□□ -1.33
UBE4B-202ENST00000343090 IGHV3OR16-8A0A075B7F1 116 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 MUC21A0A0G2JKD1 596 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 MUC21A0A140T8X8 626 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 H3BUT2 72 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 J3QW42 95 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 WISP1O95388 367 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 CDKN1AP38936 164 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 GCSAMLQ5JQS6 135 aa6.74□□□□□ -1.33
UBE4B-202ENST00000343090 TIMM23BQ5SRD1 257 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms