RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PXMP4Q9Y6I8 212 aa16.03■□□□□ 0.16
RTN1-202ENST00000342503 CYB5BO43169 146 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 SOX15O60248 233 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 YIF1AO95070 293 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 MAS1LP35410 378 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 RPL27AP46776 148 aaKnown RBP16.02■□□□□ 0.16
RTN1-202ENST00000342503 MLANAQ16655 118 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 GCSAMLQ5JQS6 135 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 PPP1R27Q86WC6 154 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 PIMREGQ9BSJ6 248 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 FBXL15Q9H469 300 aa16.02■□□□□ 0.16
RTN1-202ENST00000342503 TMA7Q9Y2S6 64 aaKnown RBP16.02■□□□□ 0.16
RTN1-202ENST00000342503 FLNCQ14315 2725 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 FOXH1O75593 365 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 TOX4O94842 621 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 SRP19P09132 144 aaKnown RBP16.02■□□□□ 0.15
RTN1-202ENST00000342503 CD69Q07108 199 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 HABP2Q14520 560 aaPredicted RBP16.02■□□□□ 0.15
RTN1-202ENST00000342503 KHDC3LQ587J8 217 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 SUN5Q8TC36 379 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 SSMEM1Q8WWF3 244 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 FAM168AQ92567 244 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 RAB24Q969Q5 203 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 P2RX4Q99571 388 aa16.02■□□□□ 0.15
RTN1-202ENST00000342503 ZFP92A6NM28 416 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 DNASE2O00115 360 aaPredicted RBP16.01■□□□□ 0.15
RTN1-202ENST00000342503 ACTL6BO94805 426 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 REG1AP05451 166 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 DEFA4P12838 97 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 COMPP49747 757 aaPredicted RBP16.01■□□□□ 0.15
RTN1-202ENST00000342503 GNB1P62873 340 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 DYNAPQ8N1N2 210 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 TBX15Q96SF7 602 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 TACC2O95359 2948 aa16.01■□□□□ 0.15
RTN1-202ENST00000342503 USP9XQ93008 2570 aaPredicted RBP16■□□□□ 0.15
RTN1-202ENST00000342503 AKAP6Q13023 2319 aa16■□□□□ 0.15
RTN1-202ENST00000342503 IGLC7A0M8Q6 106 aa16■□□□□ 0.15
RTN1-202ENST00000342503 HSPB1P04792 205 aaKnown RBP16■□□□□ 0.15
RTN1-202ENST00000342503 FBP1P09467 338 aa16■□□□□ 0.15
RTN1-202ENST00000342503 BCL2P10415 239 aa16■□□□□ 0.15
RTN1-202ENST00000342503 CDC34P49427 236 aaPredicted RBP16■□□□□ 0.15
RTN1-202ENST00000342503 SUB1P53999 127 aaKnown RBP eCLIP16■□□□□ 0.15
RTN1-202ENST00000342503 ATP5J2P56134 94 aa16■□□□□ 0.15
RTN1-202ENST00000342503 RAB31Q13636 194 aa16■□□□□ 0.15
RTN1-202ENST00000342503 GAMTQ14353 236 aa16■□□□□ 0.15
RTN1-202ENST00000342503 SSX2Q16385 188 aa16■□□□□ 0.15
RTN1-202ENST00000342503 MINOS1Q5TGZ0 78 aa16■□□□□ 0.15
RTN1-202ENST00000342503 TMEM144Q7Z5S9 345 aa16■□□□□ 0.15
RTN1-202ENST00000342503 C10orf105Q8TEF2 133 aa16■□□□□ 0.15
RTN1-202ENST00000342503 KCNIP2Q9NS61 270 aa16■□□□□ 0.15
RTN1-202ENST00000342503 MINOS1-NBL1R4GNA1 71 aa16■□□□□ 0.15
RTN1-202ENST00000342503 PLXNB1O43157 2135 aa16■□□□□ 0.15
RTN1-202ENST00000342503 FAM74A7A6NL05 159 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 SEC14L6B5MCN3 397 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 CD24P25063 80 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 GPX4P36969 197 aaPredicted RBP15.99■□□□□ 0.15
RTN1-202ENST00000342503 LGALS4P56470 323 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 FAM74A3Q4VXF1 159 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 SLC16A13Q7RTY0 426 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 CLRN3Q8NCR9 226 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 C17orf50Q8WW18 174 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 TMPRSS5Q9H3S3 457 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 VWC2LB2RUY7 222 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 FCN1O00602 326 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 NUPL2O15504 423 aaKnown RBP15.99■□□□□ 0.15
RTN1-202ENST00000342503 MOSP00540 346 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 RPL29P47914 159 aaKnown RBP15.99■□□□□ 0.15
RTN1-202ENST00000342503 B2MP61769 119 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 PLGLAQ15195 96 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 MRPL41Q8IXM3 137 aaKnown RBP15.99■□□□□ 0.15
RTN1-202ENST00000342503 STPG3Q8N7X2 389 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 RNASEH2CQ8TDP1 164 aaKnown RBP15.99■□□□□ 0.15
RTN1-202ENST00000342503 LPAR2Q9HBW0 351 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 ZFYVE26Q68DK2 2539 aa15.99■□□□□ 0.15
RTN1-202ENST00000342503 IGHV4-61A0A0C4DH41 118 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 OOSP1A8MZH6 123 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 IFNA1P01562 189 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 SNRNP70P08621 437 aaKnown RBP15.98■□□□□ 0.15
RTN1-202ENST00000342503 SSBP2P81877 361 aaPredicted RBP15.98■□□□□ 0.15
RTN1-202ENST00000342503 PMS2P11Q13670 270 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 MMDQ15546 238 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 FBLN7Q53RD9 439 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 SOHLH1Q5JUK2 328 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 CCDC144NLQ6NUI1 221 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 CLEC2AQ6UVW9 174 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 CACNG8Q8WXS5 425 aa15.98■□□□□ 0.15
RTN1-202ENST00000342503 EAF1Q96JC9 268 aaPredicted RBP15.98■□□□□ 0.15
RTN1-202ENST00000342503 IGKV1OR2-108A0A075B7D4 117 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 NDUFS8O00217 210 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 NBR2O15453 112 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 COX6B1P14854 86 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 AREGP15514 252 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 UBE2E1P51965 193 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 HES1Q14469 280 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 NPBQ8NG41 125 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 OR2T6Q8NHC8 308 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 SLC35E1Q96K37 410 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 SLC45A2Q9UMX9 530 aa15.97■□□□□ 0.15
RTN1-202ENST00000342503 POLR3KQ9Y2Y1 108 aaPredicted RBP15.97■□□□□ 0.15
RTN1-202ENST00000342503 A0A1W2PPV4 95 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms