RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 TWIST1Q15672 202 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 CYP2G1PQ6ZSU1 146 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 TRAV14DV4A0A0A6YYC5 116 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 H3BTX0 84 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 TMEM177Q53S58 311 aa12.56□□□□□ -0.4
PCDHB13-201ENST00000341948 SNCGO76070 127 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 AGAP20933 346 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 G0S2P27469 103 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 MORN2Q502X0 79 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 IGHV3-49A0A0A0MS15 119 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 IGKV1-12A0A0C4DH73 117 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 IGKV1D-12P01611 117 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 MARVELD3Q96A59 401 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 DUX5Q96PT3 197 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 NAT1P18440 290 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 RNF151Q2KHN1 245 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 ZNF506Q5JVG8 444 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 M0R143 59 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 NBR2O15453 112 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 NUP37Q8NFH4 326 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 NEUROG1Q92886 237 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 BET1LQ9NYM9 111 aa12.55□□□□□ -0.4
PCDHB13-201ENST00000341948 TMEM178BH3BS89 294 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 MPZP25189 248 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 MAS1LP35410 378 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 HERVK_113P61574 105 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 A0A087X0M5 115 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 A0A1B0GX30 115 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 A0A1W2PRX2 142 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 LY6HO94772 140 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 PRSS22Q9GZN4 317 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 CDC42EP3Q9UKI2 254 aa12.54□□□□□ -0.4
PCDHB13-201ENST00000341948 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 CD81P60033 236 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 VN1R17PQ8TDU5 208 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 IGKV1D-8A0A087WSZ0 117 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 B4DSR2 109 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 GPR183P32249 361 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 TFF3Q07654 80 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 RRN3P1Q2M238 152 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 C18orf12Q96KH6 178 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 M0QZK8 103 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 IGFBP2P18065 325 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 LY6G6FQ5SQ64 297 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 SGK494Q96LW2 274 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 KIAA1671Q9BY89 1806 aa12.53□□□□□ -0.4
PCDHB13-201ENST00000341948 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 GOLT1AQ6ZVE7 132 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 PNRC2Q9NPJ4 139 aaKnown RBP12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 FOXA2Q9Y261 457 aaPredicted RBP12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 LOC389332A0A1B0GUA5 103 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 J3QKU1 62 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 SAA1P0DJI8 122 aaPredicted RBP12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 EGR1P18146 543 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 RPS20P60866 119 aaKnown RBP12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 SCGB1D4Q6XE38 83 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 ELOVL1Q9BW60 279 aa12.52□□□□□ -0.4
PCDHB13-201ENST00000341948 TIMM23O14925 209 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 SRSF12Q8WXF0 261 aaKnown RBP12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 DIRC3C9JPN6 131 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 DLX6P56179 175 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 SNRPD3P62318 126 aaKnown RBP12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 ZNF525Q8N782 197 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 ZNF383Q8NA42 475 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 VPS25Q9BRG1 176 aa12.52□□□□□ -0.41
PCDHB13-201ENST00000341948 CKS2P33552 79 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 PGLYRP4Q96LB8 373 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 RNF126Q9BV68 326 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 PAM16Q9Y3D7 125 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 IGHV3OR16-8A0A075B7F1 116 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 LILRA1O75019 489 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 GCGP01275 180 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 IGKV3-15P01624 115 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 RPL13AP40429 203 aaKnown RBP12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 KIAA2026Q5HYC2 2103 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 E7EQL1 145 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 VENTXO95231 258 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 CLEC19AQ6UXS0 136 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms