RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 CD24P25063 80 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 RPP25LQ8N5L8 163 aaKnown RBP11.3□□□□□ -0.6
TMEM248-201ENST00000341567 LIME1Q9H400 295 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 CGAP01215 116 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 ARL16Q0P5N6 197 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 WDR82Q6UXN9 313 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 IGKV3D-15A0A087WSY6 115 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 LINC00869P0C866 280 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 UQCRFS1P47985 274 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 CDPF1Q6NVV7 123 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
TMEM248-201ENST00000341567 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 SPACA3Q8IXA5 215 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 MRPS18CQ9Y3D5 142 aaKnown RBP11.29□□□□□ -0.6
TMEM248-201ENST00000341567 C2CD3Q4AC94 2353 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 NAV2Q8IVL1 2488 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 J3KRW8 73 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 C1orf147Q96MC9 270 aaPredicted RBP11.29□□□□□ -0.6
TMEM248-201ENST00000341567 SFXN3Q9BWM7 321 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
TMEM248-201ENST00000341567 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 C10orf113Q5VZT2 155 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 C20orf204Q6ZNR8 217 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
TMEM248-201ENST00000341567 SNRNP40Q96DI7 357 aaKnown RBP11.29□□□□□ -0.6
TMEM248-201ENST00000341567 A0A1W2PN81 502 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 LY6HO94772 140 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 GCHFRP30047 84 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 TMPRSS3P57727 454 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
TMEM248-201ENST00000341567 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-201ENST00000341567 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 USP9XQ93008 2570 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-201ENST00000341567 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 WT1P19544 449 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-201ENST00000341567 STPG3Q8N7X2 389 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 OR1L8Q8NGR8 309 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 MPDU1O75352 247 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-201ENST00000341567 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-201ENST00000341567 SPSB3Q6PJ21 355 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
TMEM248-201ENST00000341567 IGHV3OR16-8A0A075B7F1 116 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 OR4A47Q6IF82 309 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 ZNF664Q8N3J9 261 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.6
TMEM248-201ENST00000341567 ASCL3Q9NQ33 180 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 RNF115Q9Y4L5 304 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 SELENOKQ9Y6D0 94 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 OBSL1O75147 1896 aa11.27□□□□□ -0.6
TMEM248-201ENST00000341567 NUP210Q8TEM1 1887 aaPredicted RBP11.27□□□□□ -0.6
TMEM248-201ENST00000341567 WISP2O76076 250 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 TMEM50AO95807 157 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 FAM222BQ8WU58 562 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 ADAMTS9Q9P2N4 1935 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 DPRXA6NFQ7 191 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 SNAI2O43623 268 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 Q6ZRM9 215 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 NABP2Q9BQ15 211 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 CFAP54Q96N23 3096 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
TMEM248-201ENST00000341567 VENTXO95231 258 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 FAM57AQ8TBR7 257 aa11.27□□□□□ -0.61
TMEM248-201ENST00000341567 IGHV1-69-2A0A0G2JMI3 117 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 PGPA6NDG6 321 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 IFITM10A6NMD0 228 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 MT-ND6P03923 174 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
TMEM248-201ENST00000341567 S100A7P31151 101 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 ADMP35318 185 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 NRN1LQ496H8 165 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 COX19Q49B96 90 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 RNASE7Q9H1E1 156 aaKnown RBP11.26□□□□□ -0.61
TMEM248-201ENST00000341567 TEX50A0A1B0GTY4 177 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 A1L4Q6 167 aa11.26□□□□□ -0.61
TMEM248-201ENST00000341567 IGHV2-70P01814 119 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms