RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TEX50A0A1B0GTY4 177 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 NDUFB3O43676 98 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 CXorf1O96002 111 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 SAA1P0DJI8 122 aaPredicted RBP12.19□□□□□ -0.46
TPM3-208ENST00000341485 IGFBP2P18065 325 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 COL8A2P25067 703 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 TMEM200BQ69YZ2 307 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 ZNF714Q96N38 554 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 DERL1Q9BUN8 251 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 PKDREJQ9NTG1 2253 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 USP24Q9UPU5 2620 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 TNCP24821 2201 aa12.19□□□□□ -0.46
TPM3-208ENST00000341485 A6NNC1 897 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 F6UZH7 168 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 TNFRSF13BO14836 293 aaPredicted RBP12.18□□□□□ -0.46
TPM3-208ENST00000341485 NDUFB4O95168 129 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 RPL29P47914 159 aaKnown RBP12.18□□□□□ -0.46
TPM3-208ENST00000341485 LYPD2Q6UXB3 125 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 OR5T1Q8NG75 326 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 ADGRG4Q8IZF6 3080 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 S100PP25815 95 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 LINC01551Q86U37 167 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 DTX2Q86UW9 622 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 HIST3H2BBQ8N257 126 aa12.18□□□□□ -0.46
TPM3-208ENST00000341485 NEU4Q8WWR8 484 aaPredicted RBP12.18□□□□□ -0.46
TPM3-208ENST00000341485 SEPSECSQ9HD40 501 aaKnown RBP12.18□□□□□ -0.46
TPM3-208ENST00000341485 A0A1W2PPR1 153 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 H0YJW9 148 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 GCHFRP30047 84 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 PRR20EP86478 221 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 PRR20CP86479 221 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 PRR20DP86480 221 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 PRR20BP86481 221 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 PRR20AP86496 221 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 CLEC12BQ2HXU8 276 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 OR4X1Q8NH49 305 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 GSN-AS1Q9NRJ2 163 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 YTHDF2Q9Y5A9 579 aaKnown RBP12.17□□□□□ -0.46
TPM3-208ENST00000341485 ELOA3CA0A087WX78 387 aaPredicted RBP12.17□□□□□ -0.46
TPM3-208ENST00000341485 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 FABP1P07148 127 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 LINC00869P0C866 280 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 RHOBP62745 196 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 RAB31Q13636 194 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 H1FXQ92522 213 aaKnown RBP12.17□□□□□ -0.46
TPM3-208ENST00000341485 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 PCGF1Q9BSM1 259 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
TPM3-208ENST00000341485 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
TPM3-208ENST00000341485 CTSZQ9UBR2 303 aa12.17□□□□□ -0.46
TPM3-208ENST00000341485 RALYQ9UKM9 306 aaKnown RBP12.17□□□□□ -0.46
TPM3-208ENST00000341485 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 FOXH1O75593 365 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 APOA2P02652 100 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 CHRNA7P36544 502 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 CTAG1AP78358 180 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 PDZD11Q5EBL8 140 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 OSR1Q8TAX0 266 aaPredicted RBP12.16□□□□□ -0.46
TPM3-208ENST00000341485 GPR61Q9BZJ8 451 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 OR51M1Q9H341 326 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 KAAG1Q9UBP8 84 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 SLC45A2Q9UMX9 530 aa12.16□□□□□ -0.46
TPM3-208ENST00000341485 DVL1O14640 695 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 GGCTO75223 188 aaKnown RBP12.15□□□□□ -0.46
TPM3-208ENST00000341485 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
TPM3-208ENST00000341485 S100A2P29034 98 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
TPM3-208ENST00000341485 REG1BP48304 166 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 C2orf83Q53S99 150 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 OR5AN1Q8NGI8 311 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 OR5B3Q8NH48 314 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 FKBP11Q9NYL4 201 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 MIOXQ9UGB7 285 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 A0A1W2PPQ1 181 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 PGPEP1LA6NFU8 196 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 LY6HO94772 140 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 TMEM144Q7Z5S9 345 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 OR10W1Q8NGF6 305 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 IGSF10Q6WRI0 2623 aa12.15□□□□□ -0.46
TPM3-208ENST00000341485 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 IGKV1OR2-108A0A075B7D4 117 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 LINC00587B1AMM8 73 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 IGHV2-70P01814 119 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 RNF224P0DH78 156 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 CDKN1AP38936 164 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 MIR17HGQ75NE6 70 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms