RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ZNF716A6NP11 495 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 H3BRM9 83 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 CCNOP22674 350 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 SEC11AP67812 179 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 SLC35E4Q6ICL7 350 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 GAPTQ8N292 157 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 OR5A1Q8NGJ0 315 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 OR10AG1Q8NH19 301 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 RDH5Q92781 318 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 MSRB2Q9Y3D2 182 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 V9GYV3 84 aa9.85□□□□□ -0.83
RTN3-203ENST00000341307 OR11H12B2RN74 326 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 PRSS12P56730 875 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 C10orf128Q5T292 105 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 OR11H1Q8NG94 326 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 OR11H2Q8NH07 326 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 C19orf24Q9BVV8 132 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 TNRC6AQ8NDV7 1962 aaKnown RBP9.84□□□□□ -0.83
RTN3-203ENST00000341307 SYNGR2O43760 224 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 B4GALT1P15291 398 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 UQCRFS1P47985 274 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 CX3CL1P78423 397 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 RSPO1Q2MKA7 263 aaPredicted RBP9.84□□□□□ -0.83
RTN3-203ENST00000341307 INO80CQ6PI98 192 aaPredicted RBP9.84□□□□□ -0.83
RTN3-203ENST00000341307 STPG3Q8N7X2 389 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 PIGTQ969N2 578 aa9.84□□□□□ -0.83
RTN3-203ENST00000341307 BOKQ9UMX3 212 aaPredicted RBP9.84□□□□□ -0.83
RTN3-203ENST00000341307 A0A0G2JLM5 398 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 SCO2A0A1W2PP80 73 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 ANKRD30BLA7E2S9 258 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 HSBP1O75506 76 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 ADH4P08319 380 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 SLC35B1P78383 322 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 SLC38A11Q08AI6 406 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 C3AR1Q16581 482 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 NRN1LQ496H8 165 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 DOK3Q7L591 496 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 AAED1Q7RTV5 226 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 OR5D13Q8NGL4 314 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 NEU4Q8WWR8 484 aaPredicted RBP9.83□□□□□ -0.84
RTN3-203ENST00000341307 LYZL4Q96KX0 146 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 FAM110AQ9BQ89 295 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 FAM173AQ9BQD7 235 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 TTTY12Q9BZ98 90 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 USP24Q9UPU5 2620 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 CRXO43186 299 aaPredicted RBP9.83□□□□□ -0.84
RTN3-203ENST00000341307 ZNHIT1O43257 154 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 HTR1DP28221 377 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 TMEM249Q2WGJ8 235 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 FOXI2Q6ZQN5 318 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 TMEM204Q9BSN7 226 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 TECRQ9NZ01 308 aaKnown RBP9.83□□□□□ -0.84
RTN3-203ENST00000341307 JPT1Q9UK76 154 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 SPCS1Q9Y6A9 102 aa9.83□□□□□ -0.84
RTN3-203ENST00000341307 IGKV1D-13A0A0B4J2D9 117 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 TRBV7-9A0A0J9YWB2 115 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 CLDN1O95832 211 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 IGKV1-13P0DP09 117 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 IGFBP2P18065 325 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 REG1BP48304 166 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 TMEM97Q5BJF2 176 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 FAM120AOSQ5T036 256 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 GJC3Q8NFK1 279 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 C10orf35Q96D05 121 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 MED12LQ86YW9 2145 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 ANGPTL7O43827 346 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 LIPFP07098 398 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 SPANXN5Q5MJ07 72 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 FGFBP3Q8TAT2 258 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 LSM10Q969L4 123 aaKnown RBP9.82□□□□□ -0.84
RTN3-203ENST00000341307 C1RLQ9NZP8 487 aa9.82□□□□□ -0.84
RTN3-203ENST00000341307 PIEZO2Q9H5I5 2752 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 RHBDL1O75783 438 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 COX5AP20674 150 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 USF1P22415 310 aaPredicted RBP9.81□□□□□ -0.84
RTN3-203ENST00000341307 GRB2P62993 217 aaKnown RBP9.81□□□□□ -0.84
RTN3-203ENST00000341307 PLGLB1Q02325 96 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 CEACAM16Q2WEN9 425 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 FOXL2NBQ6ZUU3 175 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 TMEM251Q8N6I4 163 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 TMUB1Q9BVT8 246 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 TNFRSF19Q9NS68 423 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 ZNF407Q9C0G0 2248 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 A0A1W2PPM0 123 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 H0Y980 276 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 TNFRSF13BO14836 293 aaPredicted RBP9.81□□□□□ -0.84
RTN3-203ENST00000341307 HLA-DQA1P01909 254 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 AMY1AP04745 511 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 TFF3Q07654 80 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 FAM27BQ5VT28 67 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 OR1L1Q8NH94 360 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 SPSB4Q96A44 273 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 TMEM45BQ96B21 275 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 HIF1ANQ9NWT6 349 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 CACNG5Q9UF02 275 aa9.81□□□□□ -0.84
RTN3-203ENST00000341307 PKD1L2Q7Z442 2459 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms