RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 NMBP08949 121 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 FBP1P09467 338 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 ARL16Q0P5N6 197 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
CLDN4-201ENST00000340958 EBI3Q14213 229 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 C5orf64Q2M2E5 130 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 KLF17Q5JT82 389 aaPredicted RBP13.85□□□□□ -0.19
CLDN4-201ENST00000340958 TMED6Q8WW62 240 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 ABCA1O95477 2261 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 ZFHX3Q15911 3703 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 E7EUB6 86 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 FCN1O00602 326 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 NDUFA3O95167 84 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 ZP3P21754 424 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 ATP6V1FQ16864 119 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 FAM74A1Q5RGS3 127 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 HAPLN4Q86UW8 402 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 NANPQ8TBE9 248 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 ABHD5Q8WTS1 349 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 RASL11BQ9BPW5 248 aa13.84□□□□□ -0.19
CLDN4-201ENST00000340958 SMCO3A2RU48 225 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 SUB1P53999 127 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLDN4-201ENST00000340958 FBLN7Q53RD9 439 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 STPG2Q8N412 459 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 Q8N6K4 173 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 SSX3Q99909 188 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 TET2Q6N021 2002 aaPredicted RBP13.83□□□□□ -0.2
CLDN4-201ENST00000340958 NSD1Q96L73 2696 aaPredicted RBP13.83□□□□□ -0.2
CLDN4-201ENST00000340958 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 APELAP0DMC3 54 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 BPIFB3P59826 476 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 FXYD3Q14802 87 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 MRGPRG-AS1Q2M3A8 158 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 SRSF12Q8WXF0 261 aaKnown RBP13.83□□□□□ -0.2
CLDN4-201ENST00000340958 CXorf58Q96LI9 332 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 TMEM147Q9BVK8 224 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 SLC25A32Q9H2D1 315 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
CLDN4-201ENST00000340958 REG1AP05451 166 aa13.82□□□□□ -0.2
CLDN4-201ENST00000340958 ATP5IP56385 69 aaPredicted RBP13.82□□□□□ -0.2
CLDN4-201ENST00000340958 LRRC75BQ2VPJ9 315 aa13.82□□□□□ -0.2
CLDN4-201ENST00000340958 SSMEM1Q8WWF3 244 aa13.82□□□□□ -0.2
CLDN4-201ENST00000340958 GINS3Q9BRX5 216 aa13.82□□□□□ -0.2
CLDN4-201ENST00000340958 SOX21Q9Y651 276 aaPredicted RBP13.82□□□□□ -0.2
CLDN4-201ENST00000340958 SETD2Q9BYW2 2564 aaPredicted RBP13.81□□□□□ -0.2
CLDN4-201ENST00000340958 PMS2P5A8MQ11 134 aa13.81□□□□□ -0.2
CLDN4-201ENST00000340958 LY6G6DO95868 133 aa13.81□□□□□ -0.2
CLDN4-201ENST00000340958 WT1-ASQ06250 92 aa13.81□□□□□ -0.2
CLDN4-201ENST00000340958 TUSC1Q2TAM9 212 aa13.81□□□□□ -0.2
CLDN4-201ENST00000340958 Q71RC1 249 aaPredicted RBP13.81□□□□□ -0.2
CLDN4-201ENST00000340958 GNPNAT1Q96EK6 184 aaPredicted RBP13.81□□□□□ -0.2
CLDN4-201ENST00000340958 LINC00052Q96N35 136 aa13.81□□□□□ -0.2
CLDN4-201ENST00000340958 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 INS-IGF2F8WCM5 200 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 KRTAP1-1Q07627 177 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 RNF141Q8WVD5 230 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 C22orf15Q8WYQ4 148 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLDN4-201ENST00000340958 NIPBLQ6KC79 2804 aaeCLIP13.8□□□□□ -0.2
CLDN4-201ENST00000340958 H3BUX3 64 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 RNASE2P10153 161 aaKnown RBP13.8□□□□□ -0.2
CLDN4-201ENST00000340958 ATP6V0CP27449 155 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 C2orf83Q53S99 150 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 HSD17B13Q7Z5P4 300 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-201ENST00000340958 TMEM219Q86XT9 240 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 OR2G3Q8NGZ4 309 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 SLC25A33Q9BSK2 321 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 SH3BGRL3Q9H299 93 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 ARV1Q9H2C2 271 aa13.8□□□□□ -0.2
CLDN4-201ENST00000340958 TNCP24821 2201 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 A0A1B0GW64 132 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 KRBOX1C9JBD0 128 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 SEC11BP0C7V7 166 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 LY6EQ16553 131 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 ZNF562Q6V9R5 426 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 EIF4E3Q8N5X7 224 aaKnown RBP13.79□□□□□ -0.2
CLDN4-201ENST00000340958 Q8N9W7 124 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 TMEM170AQ8WVE7 144 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 ARPC1AQ92747 370 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 GGACTQ9BVM4 153 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 PFDN2Q9UHV9 154 aa13.79□□□□□ -0.2
CLDN4-201ENST00000340958 PRH1P02810 166 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 SPP1P10451 314 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 DEFA4P12838 97 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 AREGP15514 252 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 FGF7P21781 194 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 CX3CL1P78423 397 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 RUNX1Q01196 453 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 FAM103A1Q9BTL3 118 aaKnown RBP13.78□□□□□ -0.2
CLDN4-201ENST00000340958 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
CLDN4-201ENST00000340958 NF1P21359 2839 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 SVEP1Q4LDE5 3571 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 IGLC7A0M8Q6 106 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 ZNF705EA8MWA4 302 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-201ENST00000340958 DLK1P80370 383 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 AKR1C1Q04828 323 aa13.78□□□□□ -0.2
CLDN4-201ENST00000340958 TMEM182Q6ZP80 229 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-201ENST00000340958 ZNF709Q8N972 641 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms