RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 NDUFA13Q9P0J0 144 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 SCP2D1Q9UJQ7 156 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 F11RQ9Y624 299 aaKnown RBP11.73□□□□□ -0.53
VAPA-201ENST00000340541 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
VAPA-201ENST00000340541 IGLV1-51P01701 117 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 HLA-AP01891 365 aaKnown RBP11.72□□□□□ -0.53
VAPA-201ENST00000340541 CSN3P07498 182 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 AKR1C2P52895 323 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
VAPA-201ENST00000340541 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 SPANXN2Q5MJ10 180 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 TOMM5Q8N4H5 51 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 ZNF502Q8TBZ5 544 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 EEF1AKMT3Q96AZ1 226 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 TMEM56Q96MV1 263 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 DNAH9Q9NYC9 4486 aa11.72□□□□□ -0.53
VAPA-201ENST00000340541 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 C3orf84H3BNL1 204 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 OR2C1O95371 312 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 SPNP16150 400 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 AP3S2P59780 193 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 ADAMTSL5Q6ZMM2 481 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 Q6ZRM9 215 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 OR2C3Q8N628 320 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 CXorf58Q96LI9 332 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 SDHCQ99643 169 aaPredicted RBP11.71□□□□□ -0.53
VAPA-201ENST00000340541 SIGLEC8Q9NYZ4 499 aa11.71□□□□□ -0.53
VAPA-201ENST00000340541 K7EIM0 57 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 GGCTO75223 188 aaKnown RBP11.7□□□□□ -0.54
VAPA-201ENST00000340541 ATG12O94817 140 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
VAPA-201ENST00000340541 ARL3P36405 182 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 SUPT4H1P63272 117 aaKnown RBP11.7□□□□□ -0.54
VAPA-201ENST00000340541 DHODHQ02127 395 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 BAK1Q16611 211 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 TATDN3Q17R31 274 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 SLC25A24Q6NUK1 477 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 SELENOHQ8IZQ5 122 aaKnown RBP11.7□□□□□ -0.54
VAPA-201ENST00000340541 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 OR1P1Q8NH06 330 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 DEDD2Q8WXF8 326 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 GALNT14Q96FL9 552 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 THYN1Q9P016 225 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
VAPA-201ENST00000340541 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
VAPA-201ENST00000340541 INS-IGF2F8WCM5 200 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 CLEC3BP05452 202 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 MECP2P51608 486 aaKnown RBP11.69□□□□□ -0.54
VAPA-201ENST00000340541 TMEM187Q14656 261 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 GPHB5Q86YW7 130 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 RBPMSQ93062 196 aaKnown RBP11.69□□□□□ -0.54
VAPA-201ENST00000340541 SCGB3A2Q96PL1 93 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 KRTAP3-3Q9BYR6 98 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 KRTAP3-2Q9BYR7 98 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 PRR13Q9NZ81 148 aa11.69□□□□□ -0.54
VAPA-201ENST00000340541 LGALS9O00182 355 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 CYB5BO43169 146 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 GP9P14770 177 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 EDN2P20800 178 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 GPR183P32249 361 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 SGPP2Q8IWX5 399 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 OR1L6Q8NGR2 347 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 SCARB1Q8WTV0 552 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 GPR146Q96CH1 333 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
VAPA-201ENST00000340541 PLEKHA3Q9HB20 300 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 ZC4H2Q9NQZ6 224 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 PEMTQ9UBM1 199 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
VAPA-201ENST00000340541 IGHV3-21A0A0B4J1V1 117 aa11.67□□□□□ -0.54
VAPA-201ENST00000340541 LY86O95711 162 aa11.67□□□□□ -0.54
VAPA-201ENST00000340541 AKR1C4P17516 323 aa11.67□□□□□ -0.54
VAPA-201ENST00000340541 IL22RA2Q969J5 263 aa11.67□□□□□ -0.54
VAPA-201ENST00000340541 C2orf70A6NJV1 201 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 A8MWP6 167 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 I3L2K1 104 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 IFNA17P01571 189 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 ZNF57Q68EA5 555 aaPredicted RBP11.66□□□□□ -0.54
VAPA-201ENST00000340541 PVRIGQ6DKI7 326 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 RNASE11Q8TAA1 199 aaKnown RBP11.66□□□□□ -0.54
VAPA-201ENST00000340541 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
VAPA-201ENST00000340541 C21orf62Q9NYP8 219 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 CACNG5Q9UF02 275 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 KCNIP3Q9Y2W7 256 aa11.66□□□□□ -0.54
VAPA-201ENST00000340541 TMEM213A2RRL7 107 aa11.65□□□□□ -0.54
VAPA-201ENST00000340541 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
VAPA-201ENST00000340541 TGOLN2O43493 480 aa11.65□□□□□ -0.54
VAPA-201ENST00000340541 ADMP35318 185 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms