RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ORM2P19652 201 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 ATP6V1FQ16864 119 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 OR4C13Q8NGP0 309 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 NABP2Q9BQ15 211 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 FOXH1O75593 365 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 IL6RP08887 468 aaPredicted RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 TMEM155Q4W5P6 130 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 SLC35E1Q96K37 410 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 DERL1Q9BUN8 251 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 CLEC7AQ9BXN2 247 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 UNKLQ9H9P5 680 aaKnown RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 SEPSECSQ9HD40 501 aaKnown RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 MYO9AB2RTY4 2548 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 C1orf196B1AJZ1 125 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 VDAC2P45880 294 aaPredicted RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 MEF2BQ02080 365 aaPredicted RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 ASPHD1Q5U4P2 390 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 OR1L8Q8NGR8 309 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 NPIPB3Q92617 1050 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 NRGNQ92686 78 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 NEIL1Q96FI4 390 aaPredicted RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 SGK494Q96LW2 274 aa8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 PSMG3Q9BT73 122 aaPredicted RBP8.25□□□□□ -1.09
RBFOX1-202ENST00000340209 BTBD17A6NE02 478 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 AREGP15514 252 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 PRRX1P54821 245 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 SSBP2P81877 361 aaPredicted RBP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 SSX3Q99909 188 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 GGTLC1Q9BX51 225 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 NPVFQ9HCQ7 196 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 TGIF2-C20orf24A0A0A6YYL0 155 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 IGHV3-35A0A0C4DH35 117 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 SH2D7A6NKC9 451 aaPredicted RBP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 PMS2P5A8MQ11 134 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 TIMM23O14925 209 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 RBFOX2O43251 390 aaKnown RBP eCLIP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 RND2P52198 227 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 KLF17Q5JT82 389 aaPredicted RBP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 MIR17HGQ75NE6 70 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 VAX2Q9UIW0 290 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 NDUFB4O95168 129 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 PSG5Q15238 335 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 ZNF506Q5JVG8 444 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 SLC35E3Q7Z769 313 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 GAB2Q9UQC2 676 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 WDR83OSQ9Y284 106 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 LOC105371242A0A075B767 164 aa8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 SSBP3Q9BWW4 388 aaPredicted RBP8.24□□□□□ -1.09
RBFOX1-202ENST00000340209 IGHV3-23P01764 117 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 RAB5BP61020 215 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 KHDC3LQ587J8 217 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 DHRS7BQ6IAN0 325 aaPredicted RBP8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 BLNKQ8WV28 456 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 HIST1H2BAQ96A08 127 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 TMEM186Q96B77 213 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 TRAV5A0A0B4J249 113 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 A0A1W2PPQ1 181 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 FCN1O00602 326 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 MBP02144 154 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 LIPFP07098 398 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 RHEBQ15382 184 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 TMEM14BQ9NUH8 114 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 SPINK4O60575 86 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 RNF212Q495C1 297 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 KDF1Q8NAX2 398 aaPredicted RBP8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 LYPD6BQ8NI32 183 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 SCRT1Q9BWW7 348 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 PARLQ9H300 379 aa8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
RBFOX1-202ENST00000340209 YIF1AO95070 293 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 RBP4P02753 201 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 RPL27AP46776 148 aaKnown RBP8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 ZNF90Q03938 601 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 WT1-ASQ06250 92 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 NHLRC2Q8NBF2 726 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 OR1B1Q8NGR6 318 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 BPESC1Q9GZL8 116 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 TOLLIPQ9H0E2 274 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 ZNF355PQ9NSJ1 428 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 NOTCH3Q9UM47 2321 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 NDUFA2O43678 99 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 EFNB3Q15768 340 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 CR1LQ2VPA4 569 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 HLA-DRB5Q30154 266 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 OSR1Q8TAX0 266 aaPredicted RBP8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 CORO2AQ92828 525 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 IGHV1-3A0A0C4DH29 117 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 LINC00869P0C866 280 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 CD81P60033 236 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
RBFOX1-202ENST00000340209 COX7A2P2O60397 106 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms