RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 Q8N402 240 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 OR51S1Q8NGJ8 323 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 ASCL2Q99929 193 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 PRRT1Q99946 306 aa11.08□□□□□ -0.64
ERCC1-203ENST00000340192 RTBDNQ9BSG5 229 aaPredicted RBP11.08□□□□□ -0.64
ERCC1-203ENST00000340192 C14orf166Q9Y224 244 aaKnown RBP11.08□□□□□ -0.64
ERCC1-203ENST00000340192 IGHV3-21A0A0B4J1V1 117 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 B3GALNT1O75752 331 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 ATG12O94817 140 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 FRMD6-AS1P0C7T7 363 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 P0C879 139 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 FOLR2P14207 255 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 UCP1P25874 307 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 AKR1C2P52895 323 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 HSPE1P61604 102 aaKnown RBP11.07□□□□□ -0.64
ERCC1-203ENST00000340192 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
ERCC1-203ENST00000340192 A0A0B4J293 547 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 TEX13DA0A0J9YY54 714 aaPredicted RBP11.06□□□□□ -0.64
ERCC1-203ENST00000340192 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 OR5AC1P0C628 307 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 CD300EQ496F6 205 aaPredicted RBP11.06□□□□□ -0.64
ERCC1-203ENST00000340192 PLET1Q6UQ28 207 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 OR2C3Q8N628 320 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 OR1L6Q8NGR2 347 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 OR1P1Q8NH06 330 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 DYNLRB2Q8TF09 96 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 THAP7Q9BT49 309 aaPredicted RBP11.06□□□□□ -0.64
ERCC1-203ENST00000340192 TMEM222Q9H0R3 208 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 NAA60Q9H7X0 242 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 MCUBQ9NWR8 336 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 SLC2A8Q9NY64 477 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 GPR132Q9UNW8 380 aa11.06□□□□□ -0.64
ERCC1-203ENST00000340192 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 TMEM213A2RRL7 107 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 A8MWP6 167 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 K7EIM0 57 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 ZNF701M0R085 212 aaPredicted RBP11.05□□□□□ -0.64
ERCC1-203ENST00000340192 TGOLN2O43493 480 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 IGHV4-30-4P0DP06 118 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 CBLN1P23435 193 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 DEFB114Q30KQ6 69 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 PYDC2Q56P42 97 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 SPINK9Q5DT21 86 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 GTSCR1Q86UQ5 136 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 ZNF114Q8NC26 417 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 SCARB1Q8WTV0 552 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 GLYATL2Q8WU03 294 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 BSCL2Q96G97 398 aaPredicted RBP11.05□□□□□ -0.64
ERCC1-203ENST00000340192 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 C21orf62Q9NYP8 219 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 SCP2D1Q9UJQ7 156 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 V9GYH0 126 aa11.05□□□□□ -0.64
ERCC1-203ENST00000340192 A0A0G2JRQ6 117 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 CRYM-AS1A6NIL9 109 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 F8W735 103 aaPredicted RBP11.04□□□□□ -0.64
ERCC1-203ENST00000340192 ST8SIA3O43173 380 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 CDS2O95674 445 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 IFNA17P01571 189 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 S100A5P33763 92 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 TM4SF20Q53R12 229 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 SGPP2Q8IWX5 399 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 SLC35G3Q8N808 338 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 RNASE11Q8TAA1 199 aaKnown RBP11.04□□□□□ -0.64
ERCC1-203ENST00000340192 LHFPL5Q8TAF8 219 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 RRNAD1Q96FB5 475 aaKnown RBP11.04□□□□□ -0.64
ERCC1-203ENST00000340192 MISP3Q96FF7 219 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 ZNF436Q9C0F3 470 aaPredicted RBP11.04□□□□□ -0.64
ERCC1-203ENST00000340192 TECRQ9NZ01 308 aaKnown RBP11.04□□□□□ -0.64
ERCC1-203ENST00000340192 SELENOKQ9Y6D0 94 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 U3KQK5 164 aa11.04□□□□□ -0.64
ERCC1-203ENST00000340192 HUWE1Q7Z6Z7 4374 aaKnown RBP11.04□□□□□ -0.64
ERCC1-203ENST00000340192 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
ERCC1-203ENST00000340192 DHODHQ02127 395 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 ZNF79Q15937 498 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 Q56UQ5 140 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 SPSB3Q6PJ21 355 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 RBPMSQ93062 196 aaKnown RBP11.03□□□□□ -0.64
ERCC1-203ENST00000340192 TRIM63Q969Q1 353 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 CHRDL1Q9BU40 450 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 PDCD10Q9BUL8 212 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 PALMDQ9NP74 551 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 MLXQ9UH92 298 aa11.03□□□□□ -0.64
ERCC1-203ENST00000340192 ZNF785A8K8V0 405 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 A8MZ25 164 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 I3L2K1 104 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 ETV6P41212 452 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 KLF9Q13886 244 aaPredicted RBP11.02□□□□□ -0.65
ERCC1-203ENST00000340192 Q6ZRM9 215 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 FAM219AQ8IW50 185 aa11.02□□□□□ -0.65
ERCC1-203ENST00000340192 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
ERCC1-203ENST00000340192 UXS1Q8NBZ7 420 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms