RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 OR6F1Q8NGZ6 308 aa14.55□□□□□ -0.08
ITGA4-202ENST00000339307 VN1R17PQ8TDU5 208 aa14.55□□□□□ -0.08
ITGA4-202ENST00000339307 FCAMRQ8WWV6 532 aa14.55□□□□□ -0.08
ITGA4-202ENST00000339307 MOB3AQ96BX8 217 aa14.55□□□□□ -0.08
ITGA4-202ENST00000339307 MIXL1Q9H2W2 232 aa14.55□□□□□ -0.08
ITGA4-202ENST00000339307 EXTL2Q9UBQ6 330 aa14.55□□□□□ -0.08
ITGA4-202ENST00000339307 HLA-DMAP28067 261 aa14.54□□□□□ -0.08
ITGA4-202ENST00000339307 S100A5P33763 92 aa14.54□□□□□ -0.08
ITGA4-202ENST00000339307 MRPS10P82664 201 aaKnown RBP14.54□□□□□ -0.08
ITGA4-202ENST00000339307 WT1-ASQ06250 92 aa14.54□□□□□ -0.08
ITGA4-202ENST00000339307 THOC7Q6I9Y2 204 aaKnown RBP14.54□□□□□ -0.08
ITGA4-202ENST00000339307 HSD17B13Q7Z5P4 300 aaPredicted RBP14.54□□□□□ -0.08
ITGA4-202ENST00000339307 UBQLN2Q9UHD9 624 aa14.54□□□□□ -0.08
ITGA4-202ENST00000339307 IGHV3OR16-8A0A075B7F1 116 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 TRAV25A0A0B4J276 109 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 ELLP55199 621 aaPredicted RBP14.53□□□□□ -0.08
ITGA4-202ENST00000339307 TSPAN5P62079 268 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 PHLDA2Q53GA4 152 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 Q56UQ5 140 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 OR2C3Q8N628 320 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 LSM10Q969L4 123 aaKnown RBP14.53□□□□□ -0.08
ITGA4-202ENST00000339307 DIRAS2Q96HU8 199 aa14.53□□□□□ -0.08
ITGA4-202ENST00000339307 GPR31O00270 319 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 ZNF207O43670 478 aaKnown RBP14.52□□□□□ -0.08
ITGA4-202ENST00000339307 C8orf88P0DMB2 117 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 S100GP29377 79 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 HRH1P35367 487 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 LAMTOR1Q6IAA8 161 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 ZNF436Q9C0F3 470 aaPredicted RBP14.52□□□□□ -0.08
ITGA4-202ENST00000339307 NDUFA4L2Q9NRX3 87 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 C21orf62Q9NYP8 219 aa14.52□□□□□ -0.08
ITGA4-202ENST00000339307 CSMD3Q7Z407 3707 aa14.52□□□□□ -0.09
ITGA4-202ENST00000339307 FGF2P09038 288 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 GPX8Q8TED1 209 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 SCARB1Q8WTV0 552 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 TMEM190Q8WZ59 177 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 BSCL2Q96G97 398 aaPredicted RBP14.51□□□□□ -0.09
ITGA4-202ENST00000339307 TMEM56Q96MV1 263 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 OVOL2Q9BRP0 275 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 FXYD6Q9H0Q3 95 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 C5orf66Q9H5L9 145 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 DAZ1Q9NQZ3 744 aaKnown RBP14.51□□□□□ -0.09
ITGA4-202ENST00000339307 PRNDQ9UKY0 176 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 ANAPC10Q9UM13 185 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 F11RQ9Y624 299 aaKnown RBP14.51□□□□□ -0.09
ITGA4-202ENST00000339307 SACSQ9NZJ4 4579 aa14.51□□□□□ -0.09
ITGA4-202ENST00000339307 CTDSPLO15194 276 aa14.5□□□□□ -0.09
ITGA4-202ENST00000339307 TNFSF8P32971 234 aa14.5□□□□□ -0.09
ITGA4-202ENST00000339307 MFAP2P55001 183 aa14.5□□□□□ -0.09
ITGA4-202ENST00000339307 FKBP11Q9NYL4 201 aa14.5□□□□□ -0.09
ITGA4-202ENST00000339307 NAT1P18440 290 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 APOC4P55056 127 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 SPSB3Q6PJ21 355 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 LINC00299Q6ZSB3 139 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 SNX29P2Q8IUI4 249 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 LYSMD2Q8IV50 215 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 SPAG8Q99932 426 aaPredicted RBP14.49□□□□□ -0.09
ITGA4-202ENST00000339307 SOSTQ9BQB4 213 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 CHRDL1Q9BU40 450 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 NDUFA4O00483 81 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 SSBP1Q04837 148 aaKnown RBP14.49□□□□□ -0.09
ITGA4-202ENST00000339307 PMS2P11Q13670 270 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 LPCAT3Q6P1A2 487 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 OR4A16Q8NH70 328 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 MISP3Q96FF7 219 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 ABHD1Q96SE0 405 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 TSC22D3Q99576 134 aa14.49□□□□□ -0.09
ITGA4-202ENST00000339307 CXorf65A6NEN9 183 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 FABP12A6NFH5 140 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 GABARAPH6UMI1 98 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 TSPAN4O14817 238 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 YIF1AO95070 293 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 ETV6P41212 452 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 H2BFWTQ7Z2G1 175 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 TBC1D26Q86UD7 250 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 OR5B3Q8NH48 314 aa14.48□□□□□ -0.09
ITGA4-202ENST00000339307 DBX1A6NMT0 343 aa14.47□□□□□ -0.09
ITGA4-202ENST00000339307 RCVRNP35243 200 aa14.47□□□□□ -0.09
ITGA4-202ENST00000339307 IL18Q14116 193 aa14.47□□□□□ -0.09
ITGA4-202ENST00000339307 DEFB135Q30KP9 77 aa14.47□□□□□ -0.09
ITGA4-202ENST00000339307 A0A0J9YWU9 116 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 OR4C46A6NHA9 309 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 C15orf61A6NNL5 157 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 K7EIM0 57 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 NUPL2O15504 423 aaKnown RBP14.46□□□□□ -0.09
ITGA4-202ENST00000339307 SPRY2O43597 315 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 RPL35AP18077 110 aaKnown RBP14.46□□□□□ -0.09
ITGA4-202ENST00000339307 SPANXN2Q5MJ10 180 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 CCDC190Q86UF4 302 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 PINX1Q96BK5 328 aaKnown RBP14.46□□□□□ -0.09
ITGA4-202ENST00000339307 LYSTQ99698 3801 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 MTFP1Q9UDX5 166 aa14.46□□□□□ -0.09
ITGA4-202ENST00000339307 IGKV3-7A0A075B6H7 116 aa14.45□□□□□ -0.1
ITGA4-202ENST00000339307 IGHV3-49A0A0A0MS15 119 aa14.45□□□□□ -0.1
ITGA4-202ENST00000339307 GSTZ1O43708 216 aaPredicted RBP14.45□□□□□ -0.1
ITGA4-202ENST00000339307 CTSDP07339 412 aaPredicted RBP14.45□□□□□ -0.1
ITGA4-202ENST00000339307 ADMP35318 185 aa14.45□□□□□ -0.1
ITGA4-202ENST00000339307 TFPI2P48307 235 aa14.45□□□□□ -0.1
ITGA4-202ENST00000339307 CNPY1Q3B7I2 92 aa14.45□□□□□ -0.1
ITGA4-202ENST00000339307 RNASE12Q5GAN4 147 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms