RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 RCHY1Q96PM5 261 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 LOC400499M0QZD8 3231 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 TRGV10A0A0A0MS01 117 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 TAS2R45P59539 299 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
PCDH8-201ENST00000338862 PEAR1Q5VY43 1037 aaPredicted RBP11.71□□□□□ -0.53
PCDH8-201ENST00000338862 SLC35E4Q6ICL7 350 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 OR4A47Q6IF82 309 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 OR2T6Q8NHC8 308 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 SNRNP40Q96DI7 357 aaKnown RBP11.71□□□□□ -0.53
PCDH8-201ENST00000338862 ASCL2Q99929 193 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 VPS25Q9BRG1 176 aa11.71□□□□□ -0.53
PCDH8-201ENST00000338862 NAV3Q8IVL0 2385 aa11.71□□□□□ -0.54
PCDH8-201ENST00000338862 GNG5P63218 68 aa11.71□□□□□ -0.54
PCDH8-201ENST00000338862 SRSF6Q13247 344 aaKnown RBP11.71□□□□□ -0.54
PCDH8-201ENST00000338862 ZNF146Q15072 292 aa11.71□□□□□ -0.54
PCDH8-201ENST00000338862 DUX4L9Q6RFH8 374 aaPredicted RBP11.71□□□□□ -0.54
PCDH8-201ENST00000338862 CD177Q8N6Q3 437 aa11.71□□□□□ -0.54
PCDH8-201ENST00000338862 OR1B1Q8NGR6 318 aa11.71□□□□□ -0.54
PCDH8-201ENST00000338862 CLEC5AQ9NY25 188 aa11.71□□□□□ -0.54
PCDH8-201ENST00000338862 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 ACSF3Q4G176 576 aaPredicted RBP11.7□□□□□ -0.54
PCDH8-201ENST00000338862 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
PCDH8-201ENST00000338862 CALYQ9NYX4 217 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 K7EN84 100 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 M0QZK8 103 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 ADH4P08319 380 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 STAG3L2P0CL84 134 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 STAG3L3P0CL85 134 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 LINC00869P0C866 280 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 PYGO2Q9BRQ0 406 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 WASHC3Q9Y3C0 194 aa11.7□□□□□ -0.54
PCDH8-201ENST00000338862 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 NTN3O00634 580 aaPredicted RBP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 PLGLAQ15195 96 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 OR10X1Q8NGY0 326 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 MBNL3Q9NUK0 354 aaKnown RBP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 CUL9Q8IWT3 2517 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 DCHS1Q96JQ0 3298 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 DYSFO75923 2080 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 ATG2AQ2TAZ0 1938 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 BRWD1-AS2P59051 145 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 SRSF7Q16629 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 MORN2Q502X0 79 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 SSX8Q7RTT4 187 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 TCTEX1D1Q8N7M0 179 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 NEU1Q99519 415 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 HCFC1P51610 2035 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 AHRRA9YTQ3 701 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 GFRA3O60609 400 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 MOSP00540 346 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 ZNF134P52741 427 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 RPL15P61313 204 aaKnown RBP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 FAM216BQ8N7L0 139 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 Q8NFD4 153 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
PCDH8-201ENST00000338862 OR8B2Q96RD0 313 aa11.69□□□□□ -0.54
PCDH8-201ENST00000338862 TNFSF13O75888 250 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 FOXL1Q12952 345 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 RTL8BQ17RB0 113 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 DEFB109BQ30KR1 87 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 PROCRQ9UNN8 238 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 A0A1W2PN81 502 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
PCDH8-201ENST00000338862 KLHDC1Q8N7A1 406 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 CCL17Q92583 94 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 MUC21A0A0G2JKD1 596 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 MUC21A0A140T8X8 626 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 CHEK1O14757 476 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 MUC21Q5SSG8 566 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
PCDH8-201ENST00000338862 SAA2-SAA4A0A096LPE2 208 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 MPDU1O75352 247 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
PCDH8-201ENST00000338862 TMEM11P17152 192 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 TCF24Q7RTU0 167 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 PGLYRP4Q96LB8 373 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 BET1LQ9NYM9 111 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 TRBV6-6A0A0A6YYG2 114 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 C3orf79P0CE67 100 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 TMEM167BQ9NRX6 74 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 UQCR10Q9UDW1 63 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 SERTM2A0A1B0GWG4 89 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 NRN1LQ496H8 165 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms