RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 FOSL1P15407 271 aa8.83□□□□□ -1
RTN3-201ENST00000338850 NPPCP23582 126 aa8.83□□□□□ -1
RTN3-201ENST00000338850 NPY1RP25929 384 aa8.83□□□□□ -1
RTN3-201ENST00000338850 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
RTN3-201ENST00000338850 YPEL3P61236 119 aaPredicted RBP8.83□□□□□ -1
RTN3-201ENST00000338850 RPL15P61313 204 aaKnown RBP8.83□□□□□ -1
RTN3-201ENST00000338850 GNB1P62873 340 aa8.83□□□□□ -1
RTN3-201ENST00000338850 FAM27E3Q08E93 113 aa8.83□□□□□ -1
RTN3-201ENST00000338850 C17orf58Q2M2W7 97 aa8.83□□□□□ -1
RTN3-201ENST00000338850 STUMQ69YW2 141 aa8.83□□□□□ -1
RTN3-201ENST00000338850 ZNF474Q6S9Z5 364 aaPredicted RBP8.83□□□□□ -1
RTN3-201ENST00000338850 REC114Q7Z4M0 266 aa8.83□□□□□ -1
RTN3-201ENST00000338850 WFDC11Q8NEX6 87 aa8.83□□□□□ -1
RTN3-201ENST00000338850 SLC24A4Q8NFF2 622 aa8.83□□□□□ -1
RTN3-201ENST00000338850 TMEM18Q96B42 140 aa8.83□□□□□ -1
RTN3-201ENST00000338850 MSL2Q9HCI7 577 aa8.83□□□□□ -1
RTN3-201ENST00000338850 HEYLQ9NQ87 328 aaPredicted RBP8.83□□□□□ -1
RTN3-201ENST00000338850 TRGV10A0A0A0MS01 117 aa8.82□□□□□ -1
RTN3-201ENST00000338850 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
RTN3-201ENST00000338850 MDFIC2A0A1B0GVS7 189 aa8.82□□□□□ -1
RTN3-201ENST00000338850 SIAH2O43255 324 aa8.82□□□□□ -1
RTN3-201ENST00000338850 CRYAAP02489 173 aa8.82□□□□□ -1
RTN3-201ENST00000338850 OR10J4P0C629 311 aa8.82□□□□□ -1
RTN3-201ENST00000338850 ESDP10768 282 aa8.82□□□□□ -1
RTN3-201ENST00000338850 FABP4P15090 132 aa8.82□□□□□ -1
RTN3-201ENST00000338850 HOXB4P17483 251 aaPredicted RBP8.82□□□□□ -1
RTN3-201ENST00000338850 FABP6P51161 128 aa8.82□□□□□ -1
RTN3-201ENST00000338850 SELENOTP62341 195 aa8.82□□□□□ -1
RTN3-201ENST00000338850 PRR20EP86478 221 aa8.82□□□□□ -1
RTN3-201ENST00000338850 PRR20CP86479 221 aa8.82□□□□□ -1
RTN3-201ENST00000338850 PRR20DP86480 221 aa8.82□□□□□ -1
RTN3-201ENST00000338850 PRR20BP86481 221 aa8.82□□□□□ -1
RTN3-201ENST00000338850 PRR20AP86496 221 aa8.82□□□□□ -1
RTN3-201ENST00000338850 DEFA6Q01524 100 aa8.82□□□□□ -1
RTN3-201ENST00000338850 GFI1BQ5VTD9 330 aa8.82□□□□□ -1
RTN3-201ENST00000338850 TEX36Q5VZQ5 186 aa8.82□□□□□ -1
RTN3-201ENST00000338850 TEPPQ6URK8 271 aa8.82□□□□□ -1
RTN3-201ENST00000338850 MRPL52Q86TS9 123 aaKnown RBP8.82□□□□□ -1
RTN3-201ENST00000338850 KRTAP1-3Q8IUG1 177 aa8.82□□□□□ -1
RTN3-201ENST00000338850 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
RTN3-201ENST00000338850 C8orf31Q8N9H6 132 aa8.82□□□□□ -1
RTN3-201ENST00000338850 BEND2Q8NDZ0 799 aa8.82□□□□□ -1
RTN3-201ENST00000338850 NUP37Q8NFH4 326 aa8.82□□□□□ -1
RTN3-201ENST00000338850 OR2Z1Q8NG97 314 aa8.82□□□□□ -1
RTN3-201ENST00000338850 TMEM190Q8WZ59 177 aa8.82□□□□□ -1
RTN3-201ENST00000338850 WFIKKN1Q96NZ8 548 aa8.82□□□□□ -1
RTN3-201ENST00000338850 RNF2Q99496 336 aa8.82□□□□□ -1
RTN3-201ENST00000338850 MS4A5Q9H3V2 200 aa8.82□□□□□ -1
RTN3-201ENST00000338850 GSX1Q9H4S2 264 aaPredicted RBP8.82□□□□□ -1
RTN3-201ENST00000338850 TMEM167BQ9NRX6 74 aa8.82□□□□□ -1
RTN3-201ENST00000338850 UFSP2Q9NUQ7 469 aa8.82□□□□□ -1
RTN3-201ENST00000338850 BEX4Q9NWD9 120 aaPredicted RBP8.82□□□□□ -1
RTN3-201ENST00000338850 FKBP11Q9NYL4 201 aa8.82□□□□□ -1
RTN3-201ENST00000338850 BET1LQ9NYM9 111 aa8.82□□□□□ -1
RTN3-201ENST00000338850 IL19Q9UHD0 177 aa8.82□□□□□ -1
RTN3-201ENST00000338850 DUSP13Q9UII6 198 aa8.82□□□□□ -1
RTN3-201ENST00000338850 DSCAMO60469 2012 aa8.81□□□□□ -1
RTN3-201ENST00000338850 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
RTN3-201ENST00000338850 IGHV3-43A0A0B4J1X8 118 aa8.81□□□□□ -1
RTN3-201ENST00000338850 A0A1W2PPQ1 181 aa8.81□□□□□ -1
RTN3-201ENST00000338850 XKRY2A2RUG3 117 aa8.81□□□□□ -1
RTN3-201ENST00000338850 DEFB108AA8MXU0 73 aa8.81□□□□□ -1
RTN3-201ENST00000338850 IGHV3-43DP0DP04 118 aa8.81□□□□□ -1
RTN3-201ENST00000338850 IL3RAP26951 378 aa8.81□□□□□ -1
RTN3-201ENST00000338850 GCHFRP30047 84 aa8.81□□□□□ -1
RTN3-201ENST00000338850 CNN1P51911 297 aaKnown RBP8.81□□□□□ -1
RTN3-201ENST00000338850 RPL19P84098 196 aaKnown RBP8.81□□□□□ -1
RTN3-201ENST00000338850 PRCDQ00LT1 54 aa8.81□□□□□ -1
RTN3-201ENST00000338850 C2orf83Q53S99 150 aa8.81□□□□□ -1
RTN3-201ENST00000338850 OR1L8Q8NGR8 309 aa8.81□□□□□ -1
RTN3-201ENST00000338850 OR5B3Q8NH48 314 aa8.81□□□□□ -1
RTN3-201ENST00000338850 SFRP2Q96HF1 295 aa8.81□□□□□ -1
RTN3-201ENST00000338850 UHRF2Q96PU4 802 aa8.81□□□□□ -1
RTN3-201ENST00000338850 OR2V2Q96R30 315 aa8.81□□□□□ -1
RTN3-201ENST00000338850 PCGF1Q9BSM1 259 aa8.81□□□□□ -1
RTN3-201ENST00000338850 ENY2Q9NPA8 101 aa8.81□□□□□ -1
RTN3-201ENST00000338850 ELOVL5Q9NYP7 299 aa8.81□□□□□ -1
RTN3-201ENST00000338850 IDI2-AS1Q9NZ38 188 aa8.81□□□□□ -1
RTN3-201ENST00000338850 RNF7Q9UBF6 113 aa8.81□□□□□ -1
RTN3-201ENST00000338850 RRHO14718 337 aa8.8□□□□□ -1
RTN3-201ENST00000338850 ARL14EPLP0DKL9 152 aa8.8□□□□□ -1
RTN3-201ENST00000338850 TNFSF4P23510 183 aa8.8□□□□□ -1
RTN3-201ENST00000338850 DDTP30046 118 aa8.8□□□□□ -1
RTN3-201ENST00000338850 SELENOVP59797 346 aa8.8□□□□□ -1
RTN3-201ENST00000338850 MEF2CQ06413 473 aaPredicted RBP8.8□□□□□ -1
RTN3-201ENST00000338850 EDDM3AQ14507 147 aa8.8□□□□□ -1
RTN3-201ENST00000338850 MSMPQ1L6U9 139 aa8.8□□□□□ -1
RTN3-201ENST00000338850 OR4A47Q6IF82 309 aa8.8□□□□□ -1
RTN3-201ENST00000338850 TEX38Q6PEX7 206 aa8.8□□□□□ -1
RTN3-201ENST00000338850 PQLC2Q6ZP29 291 aa8.8□□□□□ -1
RTN3-201ENST00000338850 ZNF788Q6ZQV5 615 aa8.8□□□□□ -1
RTN3-201ENST00000338850 SLC25A48Q6ZT89 311 aaKnown RBP8.8□□□□□ -1
RTN3-201ENST00000338850 OR4A5Q8NH83 315 aa8.8□□□□□ -1
RTN3-201ENST00000338850 RFESDQ8TAC1 157 aa8.8□□□□□ -1
RTN3-201ENST00000338850 ZNF596Q8TC21 504 aa8.8□□□□□ -1
RTN3-201ENST00000338850 GATAD1Q8WUU5 269 aa8.8□□□□□ -1
RTN3-201ENST00000338850 C1orf159Q96HA4 380 aa8.8□□□□□ -1
RTN3-201ENST00000338850 RHOVQ96L33 236 aa8.8□□□□□ -1
RTN3-201ENST00000338850 ELOVL1Q9BW60 279 aa8.8□□□□□ -1
RTN3-201ENST00000338850 MRPL32Q9BYC8 188 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms