RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 IGHV1-3A0A0C4DH29 117 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 ARF6P62330 175 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 FAM24BQ8N5W8 94 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 C15orf54Q8N8G6 183 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 BEND2Q8NDZ0 799 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 ABHD5Q8WTS1 349 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 NEU4Q8WWR8 484 aaPredicted RBP13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 TVP23CQ96ET8 276 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 P2RX4Q99571 388 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 UTP20O75691 2785 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 PAGE4O60829 102 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 RBP4P02753 201 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 LIPFP07098 398 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 MC5RP33032 325 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 PRRX1P54821 245 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 GAMTQ14353 236 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 RBMS3Q6XE24 437 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 VSTM2AQ8TAG5 236 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 CHODLQ9H9P2 273 aa13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
SCNN1A-202ENST00000338748 hCG_1809904A0A1W2PP81 198 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PPI3 338 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PR64 198 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PRV1 198 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 REG1AP05451 166 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 ARL14EPLP0DKL9 152 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 PRR20EP86478 221 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 PRR20CP86479 221 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 PRR20DP86480 221 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 PRR20BP86481 221 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 PRR20AP86496 221 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 KLRD1Q13241 179 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 SLC35E3Q7Z769 313 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 OR4A5Q8NH83 315 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 PSMB3P49720 205 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 UBE2G2P60604 165 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 C19orf35Q6ZS72 473 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 ZFP82Q8N141 532 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 SSBP3Q9BWW4 388 aaPredicted RBP13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
SCNN1A-202ENST00000338748 ABCA1O95477 2261 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 LY6LH3BQJ8 138 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 IGHV3-48P01763 117 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 LINC00869P0C866 280 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 APELAP0DMC3 54 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 MANBALQ9NQG1 85 aa13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 MAP1AP78559 2803 aaPredicted RBP13.06□□□□□ -0.32
SCNN1A-202ENST00000338748 RPL29P47914 159 aaKnown RBP13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 SSBP2P81877 361 aaPredicted RBP13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 CD69Q07108 199 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 ZNF343Q6P1L6 599 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 OR4F5Q8NH21 305 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 OR2T6Q8NHC8 308 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 RPEQ96AT9 228 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 OR4F4Q96R69 305 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 FNDC4Q9H6D8 234 aaPredicted RBP13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 SLC45A2Q9UMX9 530 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 MYO18BQ8IUG5 2567 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 CELSR2Q9HCU4 2923 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 INS-IGF2F8WCM5 200 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 OR2C1O95371 312 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 CRYGBP07316 175 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 STAG3L2P0CL84 134 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 STAG3L3P0CL85 134 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 NPPCP23582 126 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 ATP5G3P48201 142 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 KIAA0141Q14154 515 aaPredicted RBP13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 ZNF674Q2M3X9 581 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 FBLN7Q53RD9 439 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 SPNS3Q6ZMD2 512 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 OR51G1Q8NGK1 321 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 DOPEY1Q5JWR5 2465 aa13.05□□□□□ -0.32
SCNN1A-202ENST00000338748 LOC105371242A0A075B767 164 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 LGALS7P47929 136 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 ERHP84090 104 aaKnown RBP13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 HCP5Q6MZN7 132 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 SMIM7Q9BQ49 75 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 SDF2L1Q9HCN8 221 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 MRPL36Q9P0J6 103 aaKnown RBP13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 A6NNC1 897 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 SOX15O60248 233 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 MT-ND4LP03901 98 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 OR10J1P30954 320 aa13.04□□□□□ -0.32
SCNN1A-202ENST00000338748 PSG5Q15238 335 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms