RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RAP2BP61225 183 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 HSD17B13Q7Z5P4 300 aaPredicted RBP13.67□□□□□ -0.22
CHGA-202ENST00000334654 GON7Q9BXV9 100 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 ZNF436Q9C0F3 470 aaPredicted RBP13.67□□□□□ -0.22
CHGA-202ENST00000334654 PLEKHA3Q9HB20 300 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 CEBPZOSA8MTT3 80 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 HAX1O00165 279 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 SYNGR2O43760 224 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 PSMB8P28062 276 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 MFAP2P55001 183 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 POLR2GP62487 172 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHGA-202ENST00000334654 CD83Q01151 205 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 BSXQ3C1V8 233 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 DTD1Q8TEA8 209 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 NMES1Q9C002 83 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 KLK15Q9H2R5 256 aa13.66□□□□□ -0.22
CHGA-202ENST00000334654 RANGRFQ9HD47 186 aaPredicted RBP13.66□□□□□ -0.22
CHGA-202ENST00000334654 BRI3O95415 125 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 TMEM50AO95807 157 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 C1QBP02746 253 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 PRH1P02810 166 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 HOXA1P49639 335 aaPredicted RBP13.65□□□□□ -0.22
CHGA-202ENST00000334654 CYCSP99999 105 aaKnown RBP13.65□□□□□ -0.22
CHGA-202ENST00000334654 KIAA0141Q14154 515 aaPredicted RBP13.65□□□□□ -0.22
CHGA-202ENST00000334654 ZFP69Q49AA0 526 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 LCNL1Q6ZST4 164 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 RNF152Q8N8N0 203 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 HYLS1Q96M11 299 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 P2RX4Q99571 388 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 C11orf1Q9H5F2 150 aa13.65□□□□□ -0.22
CHGA-202ENST00000334654 RCL1Q9Y2P8 373 aaKnown RBP13.65□□□□□ -0.22
CHGA-202ENST00000334654 TRBV9A0A0B4J1U6 114 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 RNASE2P10153 161 aaKnown RBP13.64□□□□□ -0.23
CHGA-202ENST00000334654 PAX9P55771 341 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 SLC35B1P78383 322 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 FOXE3Q13461 319 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 RAB32Q13637 225 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 PVRIGQ6DKI7 326 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 HIST2H2BDQ6DRA6 164 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 ZNF114Q8NC26 417 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 TMEM170AQ8WVE7 144 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 WFDC12Q8WWY7 111 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 MDFIQ99750 246 aa13.64□□□□□ -0.23
CHGA-202ENST00000334654 F11RQ9Y624 299 aaKnown RBP13.64□□□□□ -0.23
CHGA-202ENST00000334654 K7EPK0 472 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 MED6O75586 246 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 SCGB1D2O95969 90 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 ELANEP08246 267 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 IAPPP10997 89 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 ERHP84090 104 aaKnown RBP13.63□□□□□ -0.23
CHGA-202ENST00000334654 MYOZ3Q8TDC0 251 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 MS4A10Q96PG2 267 aa13.63□□□□□ -0.23
CHGA-202ENST00000334654 HEYLQ9NQ87 328 aaPredicted RBP13.63□□□□□ -0.23
CHGA-202ENST00000334654 IGLV11-55A0A075B6I3 123 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 H3BUA1 57 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 WRBO00258 174 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 CD28P10747 220 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 EIF2B2P49770 351 aaKnown RBP13.62□□□□□ -0.23
CHGA-202ENST00000334654 RAB9AP51151 201 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 FGL1Q08830 312 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 COMMD1Q8N668 190 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 OR1P1Q8NH06 330 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 ENY2Q9NPA8 101 aa13.62□□□□□ -0.23
CHGA-202ENST00000334654 H0YIZ8 118 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 RPLP1P05386 114 aaKnown RBP13.61□□□□□ -0.23
CHGA-202ENST00000334654 PF4V1P10720 104 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 CD300CQ08708 224 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 MRPL41Q8IXM3 137 aaKnown RBP13.61□□□□□ -0.23
CHGA-202ENST00000334654 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 HIPK2Q9H2X6 1198 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 LSM5Q9Y4Y9 91 aaKnown RBP13.61□□□□□ -0.23
CHGA-202ENST00000334654 BOLA2-SMG1P6H3BVE0 249 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 SSSCA1O60232 199 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 DEFA5Q01523 94 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 C11orf44Q8N8P7 122 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 SMIM8Q96KF7 97 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 ZNF355PQ9NSJ1 428 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 U3KQ87 197 aa13.61□□□□□ -0.23
CHGA-202ENST00000334654 C15orf62A8K5M9 175 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 NDUFB8O95169 186 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 DEFA4P12838 97 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 SNCAP37840 140 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 HTR2BP41595 481 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 ZNF491Q8N8L2 437 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 SLC24A4Q8NFF2 622 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 CIB3Q96Q77 187 aaPredicted RBP13.6□□□□□ -0.23
CHGA-202ENST00000334654 OR4C12Q96R67 309 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 RAB40CQ96S21 281 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 RNF126Q9BV68 326 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 SLA2Q9H6Q3 261 aa13.6□□□□□ -0.23
CHGA-202ENST00000334654 DEDDO75618 318 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 OR2J3O76001 311 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 MPC2O95563 127 aa13.59□□□□□ -0.23
CHGA-202ENST00000334654 TRGV3P03979 118 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms