RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 K7EP34 96 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 MALP21145 153 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SSBP3Q9BWW4 388 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 NDUFA3O95167 84 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 MOSP00540 346 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TTTY12Q9BZ98 90 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PSMB11A5LHX3 300 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FCN3O75636 299 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SSTR5P35346 364 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PSG4Q00888 419 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM42Q69YG0 159 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FOXI3A8MTJ6 420 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 CCL1P22362 96 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FOXQ1Q9C009 403 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TOMM40O96008 361 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 C1orf162Q8NEQ5 155 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TRAV14DV4A0A0A6YYC5 116 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV1-24A0A0C4DH33 117 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PRR33A8MZF0 331 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SNRPCP09234 159 aaKnown RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 GZMBP10144 247 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 CCL7P80098 99 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 Q5BKY6 102 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 C1orf185Q5T7R7 199 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 REG4Q9BYZ8 158 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 EDA2RQ9HAV5 297 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 LHX9Q9NQ69 397 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 COL18A1P39060 1754 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SMAD7O15105 426 aaKnown RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PDCD1Q15116 288 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 BCL6BQ8N143 479 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 CCL4L1Q8NHW4 92 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 GON4LQ3T8J9 2241 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TRAV21A0A0B4J279 112 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 J3KT08 172 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 DEFB109BQ30KR1 87 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PYY3Q5JQD4 70 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PTCRAQ6ISU1 281 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 C18orf15Q96N68 181 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 DUX5Q96PT3 197 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 WFDC6Q9BQY6 131 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 ATXN7O15265 892 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SPINT1O43278 529 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SELLP14151 372 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FAM74A4Q5TZK3 123 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FAM214BQ7L5A3 538 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FAM19A2Q8N3H0 131 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 PATE1Q8WXA2 126 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SCARF2Q96GP6 870 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-202ENST00000334414 LINC00312Q9Y6C7 94 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM155Q4W5P6 130 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 SMIM20Q8N5G0 67 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM141Q96I45 108 aa4.67□□□□□ -1.66
PTPRB-202ENST00000334414 FABP5P3A8MUU1 101 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 CFPP27918 469 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 FOXA3P55318 350 aaPredicted RBP4.66□□□□□ -1.66
PTPRB-202ENST00000334414 C3AR1Q16581 482 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 BHLHA9Q7RTU4 235 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 HILPDAQ9Y5L2 63 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF638Q14966 1978 aaKnown RBP4.66□□□□□ -1.66
PTPRB-202ENST00000334414 TSC2P49815 1807 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 SRSF2Q01130 221 aaKnown RBP4.66□□□□□ -1.66
PTPRB-202ENST00000334414 C9orf118A6NHY6 69 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 PEMTQ9UBM1 199 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 ZSWIM8A7E2V4 1837 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 SCN8AQ9UQD0 1980 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 C16orf97H3BN30 126 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 FHL5Q5TD97 284 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV1-45A0A0A0MS14 117 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 GUSBP1Q15486 140 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 RNF126Q9BV68 326 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 NRXN2Q9P2S2 1712 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 RNF115Q9Y4L5 304 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 A0A0G2JK05 382 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 GFRA1P56159 465 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 KIAA1644Q3SXP7 199 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 PIMREGQ9BSJ6 248 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 R4GN57 208 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 LY6G6FQ5SQ64 297 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 LOC105371242A0A075B767 164 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 PPIAL4CA0A0B4J2A2 164 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 DUSP14O95147 198 aaKnown RBP4.66□□□□□ -1.66
PTPRB-202ENST00000334414 PPIAL4GP0DN37 164 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 CD69Q07108 199 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 TFF3Q07654 80 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 ADAMTSL5Q6ZMM2 481 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 OVOL1O14753 267 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 GFRA3O60609 400 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 EGR4Q05215 589 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
PTPRB-202ENST00000334414 DMRTC1Q5HYR2 192 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 WNT2BQ93097 391 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 K7EMI3 77 aa4.66□□□□□ -1.66
PTPRB-202ENST00000334414 MTCL1Q9Y4B5 1905 aaKnown RBP4.66□□□□□ -1.66
PTPRB-202ENST00000334414 SHISA8B8ZZ34 492 aa4.65□□□□□ -1.66
PTPRB-202ENST00000334414 PRKNO60260 465 aaPredicted RBP4.65□□□□□ -1.66
PTPRB-202ENST00000334414 HOXD3P31249 432 aaPredicted RBP4.65□□□□□ -1.66
PTPRB-202ENST00000334414 ACP7Q6ZNF0 438 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms