RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 FAM19A2Q8N3H0 131 aa19.39■□□□□ 0.7
TSKU-201ENST00000333090 TXN2Q99757 166 aa19.39■□□□□ 0.7
TSKU-201ENST00000333090 SIAH2O43255 324 aa19.39■□□□□ 0.69
TSKU-201ENST00000333090 SLC35E1Q96K37 410 aa19.39■□□□□ 0.69
TSKU-201ENST00000333090 PLEKHA3Q9HB20 300 aa19.39■□□□□ 0.69
TSKU-201ENST00000333090 OSTCQ9NRP0 149 aa19.39■□□□□ 0.69
TSKU-201ENST00000333090 BMPR1BO00238 502 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 ZNF324O75467 553 aaPredicted RBP19.38■□□□□ 0.69
TSKU-201ENST00000333090 IGKV3-15P01624 115 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 OR5G3P0C626 314 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 Q6ZT83 130 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 OR2Z1Q8NG97 314 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 DDB2Q92466 427 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 WNT10AQ9GZT5 417 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 SLC25A10Q9UBX3 287 aaPredicted RBP19.38■□□□□ 0.69
TSKU-201ENST00000333090 ZFP30Q9Y2G7 519 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 C21orf140B9A014 251 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 KIR2DS2P43631 304 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 TMEM14BQ9NUH8 114 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 HEATR1Q9H583 2144 aaKnown RBP19.38■□□□□ 0.69
TSKU-201ENST00000333090 GGTLC3B5MD39 225 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 CECR9P0C854 216 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 NTF3P20783 257 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 IBA57Q5T440 356 aaKnown RBP19.38■□□□□ 0.69
TSKU-201ENST00000333090 Q6ZN92 141 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 NEUROG1Q92886 237 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 UQCR10Q9UDW1 63 aa19.38■□□□□ 0.69
TSKU-201ENST00000333090 SAA2-SAA4A0A096LPE2 208 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 MGST3O14880 152 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 CA1P00915 261 aaPredicted RBP19.37■□□□□ 0.69
TSKU-201ENST00000333090 C3orf79P0CE67 100 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 CORO2AQ92828 525 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 ZNF503Q96F45 646 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 DNAJC4Q9NNZ3 241 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 FOXA2Q9Y261 457 aaPredicted RBP19.37■□□□□ 0.69
TSKU-201ENST00000333090 SMG1Q96Q15 3661 aaKnown RBP19.37■□□□□ 0.69
TSKU-201ENST00000333090 AMY1AP04745 511 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 TMEM164Q5U3C3 297 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 FAM214BQ7L5A3 538 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 TRIB1Q96RU8 372 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 TECRQ9NZ01 308 aaKnown RBP19.37■□□□□ 0.69
TSKU-201ENST00000333090 CDC42EP3Q9UKI2 254 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 CBY1Q9Y3M2 126 aa19.37■□□□□ 0.69
TSKU-201ENST00000333090 TRAV34A0A0B4J273 112 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 TCF21O43680 179 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 HYPMO75409 117 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 IGLC2P0DOY2 106 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 IGLC3P0DOY3 106 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 C21orf62-AS1Q17RA5 79 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 ASPHD1Q5U4P2 390 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 STPG4Q8N801 248 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 NHLRC2Q8NBF2 726 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 ARL2-SNX15V9GYD0 113 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 HLA-DQA1P01909 254 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 CALYQ9NYX4 217 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 IDI2-AS1Q9NZ38 188 aa19.36■□□□□ 0.69
TSKU-201ENST00000333090 IGKV1OR2-108A0A075B7D4 117 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 DPRXA6NFQ7 191 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 ISLRO14498 428 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 SAA2P0DJI9 122 aaPredicted RBP19.35■□□□□ 0.69
TSKU-201ENST00000333090 HNRNPA3P51991 378 aaKnown RBP19.35■□□□□ 0.69
TSKU-201ENST00000333090 NIT1Q86X76 327 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 ATOH7Q8N100 152 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 PPP1R35Q8TAP8 253 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 OR51B2Q9Y5P1 312 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 F2RL2O00254 374 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 CD59P13987 128 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 COX19Q49B96 90 aa19.35■□□□□ 0.69
TSKU-201ENST00000333090 CACNA1HO95180 2353 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 SRRM5B3KS81 715 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 CDX4O14627 284 aaPredicted RBP19.34■□□□□ 0.69
TSKU-201ENST00000333090 IGLV2-8P01709 118 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 APCSP02743 223 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 PRRX1P54821 245 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 CT45A1Q5HYN5 189 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 CT45A3Q8NHU0 189 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 TSKUQ8WUA8 353 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 SLC35D1Q9NTN3 355 aa19.34■□□□□ 0.69
TSKU-201ENST00000333090 VWA1Q6PCB0 445 aa19.33■□□□□ 0.69
TSKU-201ENST00000333090 LAMTOR2Q9Y2Q5 125 aa19.33■□□□□ 0.69
TSKU-201ENST00000333090 CADP27708 2225 aa19.33■□□□□ 0.68
TSKU-201ENST00000333090 BORCS7Q96B45 105 aa19.33■□□□□ 0.68
TSKU-201ENST00000333090 SSBP3Q9BWW4 388 aaPredicted RBP19.33■□□□□ 0.68
TSKU-201ENST00000333090 SMIM27A0A1W2PRY6 76 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 J3QR06 171 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 USF1P22415 310 aaPredicted RBP19.32■□□□□ 0.68
TSKU-201ENST00000333090 LYG1Q8N1E2 194 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 TUBG2Q9NRH3 451 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 CLCF1Q9UBD9 225 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 SP9P0CG40 484 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 SLAQ13239 276 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 GCSAMQ8N6F7 178 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 FER1L6-AS2Q96M78 137 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 MGAQ8IWI9 3026 aa19.32■□□□□ 0.68
TSKU-201ENST00000333090 PPOXP50336 477 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 SRSF6Q13247 344 aaKnown RBP19.31■□□□□ 0.68
TSKU-201ENST00000333090 MLANAQ16655 118 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 ZNF439Q8NDP4 499 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 FAM168AQ92567 244 aa19.31■□□□□ 0.68
TSKU-201ENST00000333090 ZNF331Q9NQX6 463 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms