RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 FCGR3BO75015 233 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 ARG2P78540 354 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 SPACA3Q8IXA5 215 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 SMIM12Q96EX1 92 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 SH2D2AQ9NP31 389 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 MUC21A0A0G2JKD1 596 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 MUC21A0A140T8X8 626 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 OR5B21A6NL26 309 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 K7ERU9 68 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 AMY1AP04745 511 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 MYOD1P15172 320 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 FOXE3Q13461 319 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 WDR73Q6P4I2 378 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 Q8TCH9 128 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 C9JCJ5 164 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 H0YJW9 148 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 J3QT63 122 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 C19orf35Q6ZS72 473 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 MOB1BQ7L9L4 216 aa11.11□□□□□ -0.63
CCDC88C-201ENST00000331194 NBEAP1P0C6P0 100 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 GDF1P27539 372 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 IBA57Q5T440 356 aaKnown RBP11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 PRAMEF5Q5TYX0 476 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 PRAMEF6Q5VXH4 476 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 PROP1O75360 226 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 MT-ND6P03923 174 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 CELA3AP09093 270 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 IGFBP2P18065 325 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 GABRA2P47869 451 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 OR8B2Q96RD0 313 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
CCDC88C-201ENST00000331194 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 CAMPP49913 170 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 FOXF2Q12947 444 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 NINJ1Q92982 152 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 HSD17B10Q99714 261 aaKnown RBP11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 TXNDC17Q9BRA2 123 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 DYSFO75923 2080 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 SVILO95425 2214 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 GFRA3O60609 400 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 SS18L1O75177 396 aaPredicted RBP11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 P04436 131 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 NPY1RP25929 384 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 LYSMD4Q5XG99 296 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 SMG1Q96Q15 3661 aaKnown RBP11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 HAND1O96004 215 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 MFAP2P55001 183 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 UBE2G1P62253 170 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 C3AR1Q16581 482 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 TIGITQ495A1 244 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 OR2Y1Q8NGV0 311 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 OR4A16Q8NH70 328 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 CHODLQ9H9P2 273 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 ZNF331Q9NQX6 463 aaPredicted RBP11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 TNFRSF19Q9NS68 423 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 MPC1Q9Y5U8 109 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 CEP192Q8TEP8 1941 aa11.09□□□□□ -0.63
CCDC88C-201ENST00000331194 GGTLC3B5MD39 225 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 H0Y8G0 127 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 RHOBP62745 196 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 OR5B3Q8NH48 314 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 OR52E5Q8NH55 327 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 SNAI2O43623 268 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 NHLH1Q02575 133 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 OR8B3Q8NGG8 313 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 COQ2Q96H96 371 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 PKIBQ9C010 78 aa11.08□□□□□ -0.64
CCDC88C-201ENST00000331194 DNPH1O43598 174 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 OR7C2O60412 319 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 ARR3P36575 388 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 SMIM21Q3B7S5 101 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 LRRC10Q5BKY1 277 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 PNKDQ8N490 385 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 OR13A1Q8NGR1 328 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 TMEM45BQ96B21 275 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 SARAFQ96BY9 339 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 SGK494Q96LW2 274 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 PMCHL2Q9BQD1 86 aa11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 TIMM8BQ9Y5J9 83 aaPredicted RBP11.07□□□□□ -0.64
CCDC88C-201ENST00000331194 ICE1Q9Y2F5 2266 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms