RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ID3Q02535 119 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 OR1P1Q8NH06 330 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL4A5-201ENST00000328300 GATA3P23771 443 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 RELBQ01201 579 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 FAM201AQ5SY85 155 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 VKORC1L1Q8N0U8 176 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 ZNF525Q8N782 197 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 MESP1Q9BRJ9 268 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 OR4B1Q8NGF8 309 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 Q8TCH9 128 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 SRSF8Q9BRL6 282 aaKnown RBP9.51□□□□□ -0.89
COL4A5-201ENST00000328300 ZFP30Q9Y2G7 519 aa9.51□□□□□ -0.89
COL4A5-201ENST00000328300 B4DSR2 109 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 H3BVH4 76 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 CEACAM8P31997 349 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-201ENST00000328300 LY6DQ14210 128 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 TWIST1Q15672 202 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 DMRT1Q9Y5R6 373 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 SPATA45Q537H7 98 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 COLCA1Q6ZS62 124 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 FOXA2Q9Y261 457 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-201ENST00000328300 MOB4Q9Y3A3 225 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 CKAP5Q14008 2032 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 IGKV1-12A0A0C4DH73 117 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 IGKV1D-12P01611 117 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 BTCP35070 178 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 ZNF600Q6ZNG1 722 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 OR11H4Q8NGC9 324 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 WNT2P09544 360 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-201ENST00000328300 SRSF12Q8WXF0 261 aaKnown RBP9.5□□□□□ -0.89
COL4A5-201ENST00000328300 RCC1LQ96I51 464 aaKnown RBP9.5□□□□□ -0.89
COL4A5-201ENST00000328300 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 MPTX1A8MV57 137 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 GPX1P07203 203 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 GATA4P43694 442 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 TCF24Q7RTU0 167 aa9.5□□□□□ -0.89
COL4A5-201ENST00000328300 H7C1H1 209 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 VDAC2P45880 294 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-201ENST00000328300 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 NBEAP1P0C6P0 100 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 WDR25Q64LD2 544 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-201ENST00000328300 ABCA7Q8IZY2 2146 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 A0A0A6YYD4 124 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 RRHO14718 337 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 REG1AP05451 166 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 IGHV1-8P0DP01 117 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 CCL3L1P16619 93 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-201ENST00000328300 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-201ENST00000328300 YAE1D1Q9NRH1 226 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 PARD6GQ9BYG4 376 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-201ENST00000328300 WNT10AQ9GZT5 417 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 PHLDA3Q9Y5J5 127 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 PROB1E7EW31 1015 aa9.49□□□□□ -0.89
COL4A5-201ENST00000328300 CARHSP1Q9Y2V2 147 aaKnown RBP9.49□□□□□ -0.89
COL4A5-201ENST00000328300 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
COL4A5-201ENST00000328300 UQCR10Q9UDW1 63 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 IGKV1D-13A0A0B4J2D9 117 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 IGKV1-13P0DP09 117 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 FHL1Q13642 323 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 C2orf83Q53S99 150 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 FAM53AQ6NSI3 398 aaPredicted RBP9.48□□□□□ -0.89
COL4A5-201ENST00000328300 PARLQ9H300 379 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 IGHV2-26A0A0B4J1V2 119 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 HLA-DRB1P01911 266 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 AGAP20933 346 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 CD69Q07108 199 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 COPS9Q8WXC6 57 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 TGIF2-C20orf24A0A0A6YYL0 155 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 GNLYP22749 145 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 DLX1P56177 255 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 C12orf54Q6X4T0 127 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
COL4A5-201ENST00000328300 CRYBB3P26998 211 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 ZNF474Q6S9Z5 364 aaPredicted RBP9.48□□□□□ -0.89
COL4A5-201ENST00000328300 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
COL4A5-201ENST00000328300 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 OR4C46A6NHA9 309 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 C1QL1O75973 258 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 PCP4P48539 62 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 NMUP48645 174 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 QRFPP83859 136 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 TPTE2P1Q5T6R2 138 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 SLC25A48Q6ZT89 311 aaKnown RBP9.47□□□□□ -0.89
COL4A5-201ENST00000328300 GPR61Q9BZJ8 451 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 RPRMQ9NS64 109 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 F8VVB4 439 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 F8VWA3 439 aa9.47□□□□□ -0.89
COL4A5-201ENST00000328300 FOXG1P55316 489 aaPredicted RBP9.47□□□□□ -0.89
COL4A5-201ENST00000328300 PLP1P60201 277 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms