RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MFAP2P55001 183 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 HOXA4Q00056 320 aaPredicted RBP10.51□□□□□ -0.73
CCDC60-201ENST00000327554 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 GAGE12BA1L429 117 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 SH2D7A6NKC9 451 aaPredicted RBP10.5□□□□□ -0.73
CCDC60-201ENST00000327554 K7ERU9 68 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 TFF1P04155 84 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 DUSP3P51452 185 aaPredicted RBP10.5□□□□□ -0.73
CCDC60-201ENST00000327554 FAM71F2Q6NXP2 309 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 NUP35Q8NFH5 326 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 CLCF1Q9UBD9 225 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 LOC102724200A0A096LPH7 203 aaPredicted RBP10.5□□□□□ -0.73
CCDC60-201ENST00000327554 TRGV8A0A0C4DH27 118 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 LY6G6EA0A0G2JKS1 128 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 RAB31Q13636 194 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 SLC25A34Q6PIV7 304 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 RFESDQ8TAC1 157 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 FAM216AQ8WUB2 273 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 NABP2Q9BQ15 211 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 SSBP4Q9BWG4 385 aaPredicted RBP10.5□□□□□ -0.73
CCDC60-201ENST00000327554 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
CCDC60-201ENST00000327554 U3KQA8 63 aa10.5□□□□□ -0.73
CCDC60-201ENST00000327554 TRAV8-6A0A0B4J262 113 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 M0R1X1 148 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 WNT9BO14905 357 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 LTBRP36941 435 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 SRYQ05066 204 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 LINC00173Q6ZV60 143 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 TPRX1Q8N7U7 411 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 OR2T6Q8NHC8 308 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 GCM1Q9NP62 436 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 FSCN3Q9NQT6 498 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 CD5LO43866 347 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 GRPP07492 148 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 ALKBH6Q3KRA9 238 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 C12orf54Q6X4T0 127 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 ZNF355PQ9NSJ1 428 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
CCDC60-201ENST00000327554 SYS1-DBNDD2H3BUS1 97 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 OR7C2O60412 319 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 GPR12P47775 334 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 REG1BP48304 166 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 FAM234AQ9H0X4 552 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 ZNF835Q9Y2P0 537 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 TMEM11P17152 192 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 OR2Y1Q8NGV0 311 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 SARAFQ96BY9 339 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 LINC00479Q96M42 142 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 PLEKHA3Q9HB20 300 aa10.48□□□□□ -0.73
CCDC60-201ENST00000327554 FRYQ5TBA9 3013 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 C15orf65H3BRN8 121 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 SAP30O75446 220 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 HLA-DRB1P01911 266 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 IGLC1P0CG04 106 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 ERVK-16P61578 105 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 PLGLB1Q02325 96 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 SNRNP40Q96DI7 357 aaKnown RBP10.47□□□□□ -0.73
CCDC60-201ENST00000327554 GRAMD2BQ96HH9 432 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 TRIB1Q96RU8 372 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 METRNQ9UJH8 293 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 CORTO00230 105 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 Q0VFX4 171 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 VWA1Q6PCB0 445 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 ZNF826PQ6ZT77 177 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 PLPPR2Q96GM1 343 aa10.47□□□□□ -0.73
CCDC60-201ENST00000327554 FRYLO94915 3013 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 IGHV1-24A0A0C4DH33 117 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 A0A1B0GXF2 115 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 C15orf61A6NNL5 157 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 NBEAP1P0C6P0 100 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 LTC4SQ16873 150 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 PRR31Q5SQ13 230 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 MDP1Q86V88 176 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 SLC25A40Q8TBP6 338 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 ZC2HC1AQ96GY0 325 aa10.46□□□□□ -0.73
CCDC60-201ENST00000327554 DOCK10Q96BY6 2186 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 FNDC10F2Z333 226 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 CAMPP49913 170 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 RIPPLY3P57055 190 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 RPL39P5Q59GN2 51 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 CLEC2AQ6UVW9 174 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 MOB3BQ86TA1 216 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 C11orf53Q8IXP5 236 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 DUSP13Q9UII6 198 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 CACNA1EQ15878 2313 aa10.46□□□□□ -0.74
CCDC60-201ENST00000327554 A0A087X0K7 114 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 SMPD2O60906 423 aa10.45□□□□□ -0.74
CCDC60-201ENST00000327554 ADH4P08319 380 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms