RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 UBE2V1Q13404 147 aa13.89□□□□□ -0.19
SMAD3-201ENST00000327367 C1orf194Q5T5A4 169 aa13.89□□□□□ -0.19
SMAD3-201ENST00000327367 BCL6BQ8N143 479 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-201ENST00000327367 ZNF638Q14966 1978 aaKnown RBP13.89□□□□□ -0.19
SMAD3-201ENST00000327367 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 TMEM186Q96B77 213 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 DCTN5Q9BTE1 182 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 SLC25A2Q9BXI2 301 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 A0A1W2PRE2 83 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 NPIPB11E5RHQ5 1161 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 SSBP2P81877 361 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-201ENST00000327367 RIPPLY2Q5TAB7 128 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 ZNF664Q8N3J9 261 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 PPIAL4CA0A0B4J2A2 164 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 PPIAL4GP0DN37 164 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 C18orf12Q96KH6 178 aa13.88□□□□□ -0.19
SMAD3-201ENST00000327367 GUSBP1Q15486 140 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 PKIBQ9C010 78 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 TMEM74BQ9NUR3 256 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 RREB1Q92766 1687 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 TRAV9-1A0A075B6T8 112 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 SEC11AP67812 179 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 FAM106AQ4KMX7 169 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 BMPERQ8N8U9 685 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 EEF1AKMT3Q96AZ1 226 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 GAGE12BA1L429 117 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 TRIP6Q15654 476 aaKnown RBP13.87□□□□□ -0.19
SMAD3-201ENST00000327367 DUX3Q96PT4 197 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 FBXL15Q9H469 300 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 PLSCR4Q9NRQ2 329 aa13.87□□□□□ -0.19
SMAD3-201ENST00000327367 ERVK11-1P61568 191 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 DIRC2Q96SL1 478 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 ADAMTSL5Q6ZMM2 481 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 ZNF625Q96I27 306 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-201ENST00000327367 ERG28Q9UKR5 140 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 IGKV1D-43A0A0B4J1Z2 117 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 LHX2P50458 406 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 FAM89BQ8N5H3 189 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 SCARF2Q96GP6 870 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-201ENST00000327367 A0A1B0GW15 77 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 NCR2O95944 276 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 TDGF1P3P51864 188 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 TMPRSS3P57727 454 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 CHODLQ9H9P2 273 aa13.86□□□□□ -0.19
SMAD3-201ENST00000327367 SNRPD3P62318 126 aaKnown RBP13.85□□□□□ -0.19
SMAD3-201ENST00000327367 RNF182Q8N6D2 247 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 MRAPQ8TCY5 172 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 PIKFYVEQ9Y2I7 2098 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 CKAP5Q14008 2032 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 PRR32B1ATL7 298 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 PATE3B3GLJ2 98 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 M0R2P5 195 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 TFF1P04155 84 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 CLEC7AQ9BXN2 247 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 GNB1LQ9BYB4 327 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 LOC105371242A0A075B767 164 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 OR5P3Q8WZ94 311 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 CHD5Q8TDI0 1954 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 C12orf77C9JDV5 145 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 ATXN8Q156A1 80 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 IGHV1-45A0A0A0MS14 117 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 PSG3Q16557 428 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 GATD1Q8NB37 220 aa13.85□□□□□ -0.19
SMAD3-201ENST00000327367 MDC1Q14676 2089 aaKnown RBP13.85□□□□□ -0.19
SMAD3-201ENST00000327367 KIR3DS1Q14943 382 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 IFI27L1Q96BM0 104 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 ZXDCQ2QGD7 858 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-201ENST00000327367 A0A1B0GTI1 187 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 F8VVB4 439 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 F8VWA3 439 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 NKX2-8O15522 239 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 LHX8Q68G74 356 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 SAXO1Q8IYX7 474 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 FGF16O43320 207 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 CCL21O00585 134 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 GREM1O60565 184 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 RAMP3O60896 148 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMAD3-201ENST00000327367 ITLN2Q8WWU7 325 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-201ENST00000327367 REG4Q9BYZ8 158 aa13.84□□□□□ -0.19
SMAD3-201ENST00000327367 DNAJC13O75165 2243 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 TIMP3P35625 211 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 CFAP161Q6P656 301 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 CFHR5Q9BXR6 569 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 GGTLC3B5MD39 225 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 FAM214BQ7L5A3 538 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 TOPAZ1Q8N9V7 1692 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 IGKV1D-13A0A0B4J2D9 117 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 IGKV1-13P0DP09 117 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 CDCP2Q5VXM1 449 aa13.83□□□□□ -0.2
SMAD3-201ENST00000327367 PHLDA1Q8WV24 401 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-201ENST00000327367 TRGV3P03979 118 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 PTGDSP41222 190 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 OR9G1Q8NH87 305 aa13.82□□□□□ -0.2
SMAD3-201ENST00000327367 UCP1P25874 307 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms