RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CENPVQ7Z7K6 275 aaPredicted RBP15.01□□□□□ -0.01
EXOSC3-201ENST00000327304 UBE2L5PA0A1B0GUS4 154 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 VENTXO95231 258 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 TSPAN15O95858 294 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 IGLV2-23P01705 113 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 FHITP49789 147 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 ATP5IP56385 69 aaPredicted RBP15□□□□□ -0.01
EXOSC3-201ENST00000327304 BPIFB3P59826 476 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 ZNF616Q08AN1 781 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 FAM213BQ8TBF2 198 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 RITA1Q96K30 269 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 FAM96BQ9Y3D0 163 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 RFNGQ9Y644 331 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 MXRA5Q9NR99 2828 aa15□□□□□ -0.01
EXOSC3-201ENST00000327304 TEX50A0A1B0GTY4 177 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 MDFIC2A0A1B0GVS7 189 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 VMA21Q3ZAQ7 101 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 ETV3LQ6ZN32 361 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 CCDC28AQ8IWP9 274 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 PLEKHA3Q9HB20 300 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 FOSL1P15407 271 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 MDKP21741 143 aaPredicted RBP14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 CD1BP29016 333 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 RPL8P62917 257 aaKnown RBP14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 SLC24A4Q8NFF2 622 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 BPIFCQ8NFQ6 507 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 RSG1Q9BU20 258 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 FBXO7Q9Y3I1 522 aa14.99□□□□□ -0.01
EXOSC3-201ENST00000327304 NAV3Q8IVL0 2385 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 PRSS46E5RG02 174 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 INS-IGF2F8WCM5 200 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 RRHO14718 337 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 IGKV1D-33P01593 117 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 IGKV1-33P01594 117 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 SNRNP70P08621 437 aaKnown RBP14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 FBP1P09467 338 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 DEFB112Q30KQ8 113 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 C9orf139Q6ZV77 190 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 LFNGQ8NES3 379 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 RNF5Q99942 180 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 COMMD5Q9GZQ3 224 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 MEGF9Q9H1U4 602 aa14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 TET2Q6N021 2002 aaPredicted RBP14.98□□□□□ -0.01
EXOSC3-201ENST00000327304 NPY1RP25929 384 aa14.97□□□□□ -0.01
EXOSC3-201ENST00000327304 SNCAP37840 140 aa14.97□□□□□ -0.01
EXOSC3-201ENST00000327304 TEX45Q8NA69 505 aa14.97□□□□□ -0.01
EXOSC3-201ENST00000327304 OR1L8Q8NGR8 309 aa14.97□□□□□ -0.01
EXOSC3-201ENST00000327304 BTBD17A6NE02 478 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 MYOD1P15172 320 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 DLK1P80370 383 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 HNF4GQ14541 408 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 TUSC1Q2TAM9 212 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 TEX29Q8N6K0 151 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 TMEM170AQ8WVE7 144 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 NDUFA4L2Q9NRX3 87 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 TMEM218A2RU14 115 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 FGF7P21781 194 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 CNTFRP26992 372 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 BRS3P32247 399 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 SRP14P37108 136 aaKnown RBP14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 HES1Q14469 280 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 EAF1Q96JC9 268 aaPredicted RBP14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 HINT2Q9BX68 163 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 GSX1Q9H4S2 264 aaPredicted RBP14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 WDR83OSQ9Y284 106 aa14.96□□□□□ -0.01
EXOSC3-201ENST00000327304 A0A1W2PN81 502 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 MPDU1O75352 247 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 MOSP00540 346 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 IFNA4P05014 189 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 H2AFB1P0C5Y9 115 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 CHRNA7P36544 502 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 BSXQ3C1V8 233 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 PIFOQ8TCI5 191 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 TMEM160Q9NX00 188 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 MTORP42345 2549 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 HIVEP2P31629 2446 aa14.95□□□□□ -0.02
EXOSC3-201ENST00000327304 FNDC10F2Z333 226 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 SOX15O60248 233 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 CA2P00918 260 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 CD5P06127 495 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 SRSF3P84103 164 aaKnown RBP14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 EBI3Q14213 229 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 C2orf83Q53S99 150 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 Q71RC1 249 aaPredicted RBP14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 OR2T10Q8NGZ9 312 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 NARS2Q96I59 477 aaKnown RBP14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 SSX3Q99909 188 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 NPCDR1Q9BY65 106 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 ZNF430Q9H8G1 570 aaPredicted RBP14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 F8P00451 2351 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 C17orf112F2Z3M2 114 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 SLC25A17O43808 307 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 HBE1P02100 147 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 CRYGBP07316 175 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 HNF1AP20823 631 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 RAB2AP61019 212 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 TMEM41BQ5BJD5 291 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 SPSB3Q6PJ21 355 aa14.94□□□□□ -0.02
EXOSC3-201ENST00000327304 Q8N6K4 173 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms