RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 J3QR06 171 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 ISLRO14498 428 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 APCSP02743 223 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 FAM90A1Q86YD7 464 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 TMEM14BQ9NUH8 114 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 DPRXA6NFQ7 191 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 USF1P22415 310 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-201ENST00000326956 MRPS11P82912 194 aaKnown RBP12.01□□□□□ -0.49
SSBP3-201ENST00000326956 RTL8BQ17RB0 113 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 RCHY1Q96PM5 261 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 PRNDQ9UKY0 176 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 ZFP30Q9Y2G7 519 aa12.01□□□□□ -0.49
SSBP3-201ENST00000326956 F2RL2O00254 374 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 LINC00869P0C866 280 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 GATA2P23769 480 aaPredicted RBP12□□□□□ -0.49
SSBP3-201ENST00000326956 LOXL3P58215 753 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 FAM19A2Q8N3H0 131 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 RNF114Q9Y508 228 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 SAA2-SAA4A0A096LPE2 208 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 SRRM5B3KS81 715 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 TCF21O43680 179 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 MYOD1P15172 320 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 ZNF83P51522 516 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 ADTRPQ96IZ2 230 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 PTPRBP23467 1997 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 CELSR3Q9NYQ7 3312 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 TRAV34A0A0B4J273 112 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 FNDC10F2Z333 226 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 C3orf79P0CE67 100 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 SAA2P0DJI9 122 aaPredicted RBP12□□□□□ -0.49
SSBP3-201ENST00000326956 TDGF1P13385 188 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 WNT10AQ9GZT5 417 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 IDI2-AS1Q9NZ38 188 aa12□□□□□ -0.49
SSBP3-201ENST00000326956 LNP1A1A4G5 178 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 TMEM95Q3KNT9 176 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 DDB2Q92466 427 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 CDC42EP3Q9UKI2 254 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 BMPR1BO00238 502 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 PRRX1P54821 245 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 C19orf24Q9BVV8 132 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 CLCF1Q9UBD9 225 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 LAMTOR2Q9Y2Q5 125 aa11.99□□□□□ -0.49
SSBP3-201ENST00000326956 A0A1W2PRE2 83 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 HSBP1O75506 76 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 C8orf88P0DMB2 117 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 CT45A1Q5HYN5 189 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 ATP1A1-AS1Q5TC04 95 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 STUMQ69YW2 141 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 MOB3BQ86TA1 216 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 NHLRC2Q8NBF2 726 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 CT45A3Q8NHU0 189 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 TNCP24821 2201 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 FRYQ5TBA9 3013 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 IGHV2OR16-5A0A0B4J2B6 119 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 IGLC2P0DOY2 106 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 IGLC3P0DOY3 106 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 GNG10P50151 68 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 PPOXP50336 477 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 MOGAT3Q86VF5 341 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
SSBP3-201ENST00000326956 ZNF439Q8NDP4 499 aa11.98□□□□□ -0.49
SSBP3-201ENST00000326956 HYPMO75409 117 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 MMP23AO75900 390 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 UBE2L3P68036 154 aaKnown RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 MBNL2Q5VZF2 373 aaKnown RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 ATOH7Q8N100 152 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 GCSAMQ8N6F7 178 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 Q8N976 141 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 TSKUQ8WUA8 353 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 SSBP3Q9BWW4 388 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 C20orf202A1L168 122 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 CA1P00915 261 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 CTRLP40313 264 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 C1orf162Q8NEQ5 155 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 OR2V2Q96R30 315 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 PPIAL4AQ9Y536 164 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 SMIM27A0A1W2PRY6 76 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 MFAP2P55001 183 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 C1orf229Q6ZS94 237 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-201ENST00000326956 C1orf210Q8IVY1 113 aa11.97□□□□□ -0.49
SSBP3-201ENST00000326956 REG1AP05451 166 aa11.96□□□□□ -0.49
SSBP3-201ENST00000326956 PRCDQ00LT1 54 aa11.96□□□□□ -0.49
SSBP3-201ENST00000326956 PMCHL1Q16048 86 aa11.96□□□□□ -0.49
SSBP3-201ENST00000326956 CR1LQ2VPA4 569 aa11.96□□□□□ -0.49
SSBP3-201ENST00000326956 COMMD5Q9GZQ3 224 aa11.96□□□□□ -0.49
SSBP3-201ENST00000326956 ICE1Q9Y2F5 2266 aa11.96□□□□□ -0.49
SSBP3-201ENST00000326956 ITGB1BP1O14713 200 aa11.96□□□□□ -0.5
SSBP3-201ENST00000326956 NIT1Q86X76 327 aa11.96□□□□□ -0.5
SSBP3-201ENST00000326956 STPG4Q8N801 248 aa11.96□□□□□ -0.5
SSBP3-201ENST00000326956 OR9G1Q8NH87 305 aa11.96□□□□□ -0.5
SSBP3-201ENST00000326956 ZNF503Q96F45 646 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms